FFCP PHASE1:Hg19::chr16:88825943..88825988,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:88825943..88825988,+ | |||
|description=CAGE_peak_at_chr16:88825943..88825988,+ | |description=CAGE_peak_at_chr16:88825943..88825988,+ | ||
|id=chr16:88825943..88825988,+ | |id=chr16:88825943..88825988,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.42e-08!5;CL:0000624!3.76e-07!6 | |ontology_enrichment_celltype=CL:0002322!1.42e-08!5;CL:0000624!3.76e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.36e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.36e-11,12 | |||
|ontology_enrichment_development_v019=UBERON:0005754;9.98e-16;1!UBERON:0001045;2.56e-15;1!UBERON:0004161;3.65e-12;11!UBERON:0009497;2.20e-10;13!UBERON:0007297;1.61e-08;2!UBERON:0003104;1.55e-07;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.87e-12!115;UBERON:0006947!1.58e-09!3;UBERON:0004054!1.58e-09!3;UBERON:0003135!3.43e-08!11;UBERON:0005904!3.25e-07!4 | |ontology_enrichment_uberon=UBERON:0007023!1.87e-12!115;UBERON:0006947!1.58e-09!3;UBERON:0004054!1.58e-09!3;UBERON:0003135!3.43e-08!11;UBERON:0005904!3.25e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;4.02e-20;3!UBERON:0004054;4.02e-20;3!UBERON:0000996;5.56e-16;1!UBERON:0001000;9.98e-16;1!UBERON:0000998;9.98e-16;1!UBERON:0006868;9.98e-16;1!UBERON:0005352;9.98e-16;1!UBERON:0005904;2.38e-15;4!UBERON:0001154;2.56e-15;1!UBERON:0001153;2.56e-15;1!UBERON:0009854;2.56e-15;1!UBERON:0004175;3.23e-11;21!UBERON:0001255;2.57e-08;2!UBERON:0001556;2.57e-08;2!UBERON:0002107;2.83e-07;19!UBERON:0006925;2.83e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.48e-20,3;UBERON:0004054,2.48e-20,3;UBERON:0000996,5.56e-16,1;UBERON:0001000,6.44e-16,1;UBERON:0005352,6.44e-16,1;UBERON:0000998,7.46e-16,1;UBERON:0006868,7.46e-16,1;UBERON:0005904,1.66e-15,4;UBERON:0001154,1.78e-15,1;UBERON:0001153,1.78e-15,1;UBERON:0001045,1.78e-15,1;UBERON:0001046,3.11e-12,19;UBERON:0009854,4.11e-10,23;UBERON:0000162,9.81e-10,14;UBERON:0001353,9.81e-10,14;UBERON:0000163,9.81e-10,14;UBERON:0006866,9.81e-10,14;UBERON:0000164,9.81e-10,14;UBERON:0000931,9.81e-10,14;UBERON:0004175,1.73e-09,25;UBERON:0004122,4.01e-09,15;UBERON:0009856,5.64e-09,26;UBERON:0003064,1.95e-08,28;UBERON:0001255,2.87e-08,2;UBERON:0001556,2.87e-08,2;UBERON:0002107,2.83e-07,19;UBERON:0006925,2.83e-07,19;UBERON:0008836,2.83e-07,19;UBERON:0007023,2.88e-07,114 | |||
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| ||
|short_description=p@chr16:88825943..88825988,+ | |short_description=p@chr16:88825943..88825988,+ | ||
}} | }} |
Latest revision as of 13:22, 25 July 2015
Short description: | p@chr16:88825943..88825988, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:88825943..88825988, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.36e-11 | 12 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.48e-20 | 3 |
internal male genitalia | 2.48e-20 | 3 |
vagina | 5.56e-16 | 1 |
vas deferens | 6.44e-16 | 1 |
spermatic cord | 6.44e-16 | 1 |
seminal vesicle | 7.46e-16 | 1 |
seminal fluid secreting gland | 7.46e-16 | 1 |
duct of male reproductive system | 1.66e-15 | 4 |
vermiform appendix | 1.78e-15 | 1 |
caecum | 1.78e-15 | 1 |
midgut | 1.78e-15 | 1 |
hindgut | 3.11e-12 | 19 |
digestive tract diverticulum | 4.11e-10 | 23 |
cloaca | 9.81e-10 | 14 |
anal region | 9.81e-10 | 14 |
embryonic cloaca | 9.81e-10 | 14 |
terminal part of digestive tract | 9.81e-10 | 14 |
primitive urogenital sinus | 9.81e-10 | 14 |
proctodeum | 9.81e-10 | 14 |
internal genitalia | 1.73e-09 | 25 |
genitourinary system | 4.01e-09 | 15 |
sac | 5.64e-09 | 26 |
intermediate mesoderm | 1.95e-08 | 28 |
urinary bladder | 2.87e-08 | 2 |
lower urinary tract | 2.87e-08 | 2 |
liver | 2.83e-07 | 19 |
digestive gland | 2.83e-07 | 19 |
liver bud | 2.83e-07 | 19 |
adult organism | 2.88e-07 | 114 |