FFCP PHASE1:Hg19::chr17:70026911..70026922,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-34bp_to_uc002jit.1_5end | |association_with_transcript=-34bp_to_uc002jit.1_5end | ||
|cluster_id=chr17:70026911..70026922,+ | |||
|description=CAGE_peak_1_at_uc002jit.1_5end | |description=CAGE_peak_1_at_uc002jit.1_5end | ||
|id=chr17:70026911..70026922,+ | |id=chr17:70026911..70026922,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002564;1.60e-14;3!CL:0000306;3.10e-11;4!CL:0002222;3.10e-11;4!CL:0002224;3.10e-11;4!CL:0000333;2.97e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,2.09e-14,3;CL:0000306,2.80e-11,4;CL:0002222,2.80e-11,4;CL:0002224,2.80e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0008814;4.66e-21;2!UBERON:0010056;4.66e-21;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:154;4.66e-21;2!DOID:4236;4.66e-21;2!DOID:169;6.33e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:154,4.66e-21,2;DOID:4236,4.66e-21,2;DOID:169,5.54e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.71e-30!94;UBERON:0001016!6.71e-30!94;UBERON:0001049!6.07e-28!57;UBERON:0005068!6.07e-28!57;UBERON:0006241!6.07e-28!57;UBERON:0007135!6.07e-28!57;UBERON:0002616!8.38e-27!59;UBERON:0005743!9.45e-27!86;UBERON:0001017!6.70e-26!82;UBERON:0000955!4.77e-25!69;UBERON:0006238!4.77e-25!69;UBERON:0002780!2.99e-23!41;UBERON:0001890!2.99e-23!41;UBERON:0006240!2.99e-23!41;UBERON:0001893!1.29e-22!34;UBERON:0002020!1.61e-22!34;UBERON:0003528!1.61e-22!34;UBERON:0003080!1.68e-22!42;UBERON:0001869!3.33e-22!32;UBERON:0002791!1.26e-21!33;UBERON:0003075!2.45e-19!86;UBERON:0007284!2.45e-19!86;UBERON:0000153!4.54e-19!129;UBERON:0007811!4.54e-19!129;UBERON:0000033!1.24e-18!123;UBERON:0004121!3.64e-18!169;UBERON:0000956!5.00e-18!25;UBERON:0000203!5.00e-18!25;UBERON:0002346!5.96e-18!90;UBERON:0003056!6.34e-18!61;UBERON:0000924!2.32e-17!173;UBERON:0006601!2.32e-17!173;UBERON:0002619!1.87e-14!22;UBERON:0001950!2.46e-14!20;UBERON:0007023!5.73e-08!115;UBERON:0004733!5.05e-07!12;UBERON:0002028!5.05e-07!12;UBERON:0007277!5.05e-07!12 | |ontology_enrichment_uberon=UBERON:0000073!6.71e-30!94;UBERON:0001016!6.71e-30!94;UBERON:0001049!6.07e-28!57;UBERON:0005068!6.07e-28!57;UBERON:0006241!6.07e-28!57;UBERON:0007135!6.07e-28!57;UBERON:0002616!8.38e-27!59;UBERON:0005743!9.45e-27!86;UBERON:0001017!6.70e-26!82;UBERON:0000955!4.77e-25!69;UBERON:0006238!4.77e-25!69;UBERON:0002780!2.99e-23!41;UBERON:0001890!2.99e-23!41;UBERON:0006240!2.99e-23!41;UBERON:0001893!1.29e-22!34;UBERON:0002020!1.61e-22!34;UBERON:0003528!1.61e-22!34;UBERON:0003080!1.68e-22!42;UBERON:0001869!3.33e-22!32;UBERON:0002791!1.26e-21!33;UBERON:0003075!2.45e-19!86;UBERON:0007284!2.45e-19!86;UBERON:0000153!4.54e-19!129;UBERON:0007811!4.54e-19!129;UBERON:0000033!1.24e-18!123;UBERON:0004121!3.64e-18!169;UBERON:0000956!5.00e-18!25;UBERON:0000203!5.00e-18!25;UBERON:0002346!5.96e-18!90;UBERON:0003056!6.34e-18!61;UBERON:0000924!2.32e-17!173;UBERON:0006601!2.32e-17!173;UBERON:0002619!1.87e-14!22;UBERON:0001950!2.46e-14!20;UBERON:0007023!5.73e-08!115;UBERON:0004733!5.05e-07!12;UBERON:0002028!5.05e-07!12;UBERON:0007277!5.05e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.60e-14;3!UBERON:0002242;1.60e-14;3!UBERON:0001033;1.60e-14;3!UBERON:0003343;3.10e-11;4!UBERON:0010077;3.10e-11;4!UBERON:0005389;3.10e-11;4!UBERON:0000484;3.10e-11;4!UBERON:0004785;3.10e-11;4!UBERON:0000965;3.10e-11;4!UBERON:0001803;3.10e-11;4!UBERON:0000013;2.97e-09;5!UBERON:0002410;2.97e-09;5!UBERON:0011135;2.97e-09;5!UBERON:0002216;2.97e-09;5!UBERON:0011134;2.97e-09;5!UBERON:0002209;2.97e-09;5!UBERON:0002213;2.97e-09;5!UBERON:0007844;2.97e-09;5!UBERON:0011138;2.97e-09;5!UBERON:0001130;2.97e-09;5!UBERON:0001066;2.97e-09;5!UBERON:0001468;2.97e-09;5!UBERON:0000974;6.33e-08;6!UBERON:0000020;6.52e-08;23!UBERON:0001032;1.27e-07;24!UBERON:0004456;1.27e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.83e-14,3;UBERON:0001033,1.83e-14,3;UBERON:0010056,1.83e-14,3;UBERON:0002242,2.09e-14,3;UBERON:0003068,2.09e-14,3;UBERON:0002328,2.09e-14,3;UBERON:0004880,2.09e-14,3;UBERON:0010077,2.80e-11,4;UBERON:0005389,2.80e-11,4;UBERON:0000484,2.80e-11,4;UBERON:0002546,2.80e-11,4;UBERON:0000965,2.80e-11,4;UBERON:0001803,2.80e-11,4;UBERON:0003073,2.80e-11,4;UBERON:0005426,2.80e-11,4;UBERON:0003343,3.42e-11,4;UBERON:0004785,3.42e-11,4;UBERON:0000013,2.53e-09,5;UBERON:0002410,2.53e-09,5;UBERON:0011135,3.49e-09,5;UBERON:0002216,3.49e-09,5;UBERON:0011134,3.49e-09,5;UBERON:0002209,3.49e-09,5;UBERON:0002213,3.49e-09,5;UBERON:0005856,3.49e-09,5;UBERON:0005866,3.49e-09,5;UBERON:0005863,3.49e-09,5;UBERON:0007844,3.49e-09,5;UBERON:0011138,3.49e-09,5;UBERON:0001130,3.49e-09,5;UBERON:0001066,3.49e-09,5;UBERON:0001468,3.49e-09,5;UBERON:0000020,1.27e-07,24;UBERON:0001032,1.27e-07,24;UBERON:0004456,1.27e-07,24 | |||
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| ||
|short_description=p1@uc002jit.1 | |short_description=p1@uc002jit.1 | ||
}} | }} |
Latest revision as of 20:30, 25 July 2015
Short description: | p1@uc002jit.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc002jit.1_5end |
Coexpression cluster: | NA |
Association with transcript: | -34bp_to_uc002jit.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 2.09e-14 | 3 |
crystallin accumulating cell | 2.80e-11 | 4 |
vertebrate lens cell | 2.80e-11 | 4 |
lens epithelial cell | 2.80e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 4.66e-21 | 2 |
carcinosarcoma | 4.66e-21 | 2 |
neuroendocrine tumor | 5.54e-08 | 6 |