FFCP PHASE1:Hg19::chr17:70636802..70636818,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:70636802..70636818,+ | |||
|coexpression_cluster_id=C367 | |||
|description=CAGE_peak_at_chr17:70636802..70636818,+ | |description=CAGE_peak_at_chr17:70636802..70636818,+ | ||
|id=chr17:70636802..70636818,+ | |id=chr17:70636802..70636818,+ | ||
|ontology_enrichment_celltype=CL:0002076!3.27e-09!43;CL:0000066!3.53e-09!254;CL:0002251!8.98e-08!21;CL:0002178!9.74e-08!3;CL:0000223!1.45e-07!59;CL:0002166!3.83e-07!3 | |ontology_enrichment_celltype=CL:0002076!3.27e-09!43;CL:0000066!3.53e-09!254;CL:0002251!8.98e-08!21;CL:0002178!9.74e-08!3;CL:0000223!1.45e-07!59;CL:0002166!3.83e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002178;8.00e-18;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,8.00e-18,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!7.54e-15!106;DOID:299!2.18e-14!25;DOID:3493!4.02e-11!2;DOID:0050687!8.75e-10!143;DOID:3119!8.72e-09!14 | |ontology_enrichment_disease=DOID:305!7.54e-15!106;DOID:299!2.18e-14!25;DOID:3493!4.02e-11!2;DOID:0050687!8.75e-10!143;DOID:3119!8.72e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:4929;4.32e-26;2!DOID:3493;5.56e-26;2!DOID:299;1.05e-18;25!DOID:3119;2.95e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,4.32e-26,2;DOID:3493,5.56e-26,2;DOID:299,1.02e-18,25;DOID:3119,2.95e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0000344!2.12e-13!12;UBERON:0004119!8.92e-13!169;UBERON:0000925!8.92e-13!169;UBERON:0006595!8.92e-13!169;UBERON:0004921!1.64e-12!129;UBERON:0004185!1.64e-12!129;UBERON:0001007!7.49e-12!155;UBERON:0001555!7.49e-12!155;UBERON:0007026!7.49e-12!155;UBERON:0005409!8.30e-12!35;UBERON:0001255!1.06e-09!2;UBERON:0001556!1.06e-09!2;UBERON:0003350!5.48e-09!5;UBERON:0000160!1.24e-07!27;UBERON:0000161!4.98e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;1.46e-50;1!UBERON:0003703;1.46e-50;1!UBERON:0001174;1.46e-50;1!UBERON:0004914;1.46e-50;1!UBERON:0002108;2.45e-40;4!UBERON:0005409;3.07e-20;22!UBERON:0002114;6.76e-18;2!UBERON:0004921;3.86e-14;33!UBERON:0002394;8.82e-14;4!UBERON:0003928;8.82e-14;4!UBERON:0000160;4.43e-12;17!UBERON:0000945;2.94e-11;5!UBERON:0010039;2.94e-11;5!UBERON:0002294;1.89e-08;7!UBERON:0001173;1.89e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,1.46e-50,1;UBERON:0003703,1.46e-50,1;UBERON:0001174,1.46e-50,1;UBERON:0004914,1.46e-50,1;UBERON:0002108,2.71e-40,4;UBERON:0005409,5.19e-18,25;UBERON:0002114,6.76e-18,2;UBERON:0000160,4.55e-12,17;UBERON:0002394,1.22e-09,6;UBERON:0003928,1.22e-09,6;UBERON:0000945,1.59e-07,8;UBERON:0010039,1.59e-07,8;UBERON:0002294,7.48e-07,9;UBERON:0001173,7.48e-07,9;UBERON:0004912,7.48e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.269605053441981,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.455173793141999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72045208577053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0.163771917510097,3.84425824164318,0,0,0,0,0,0.548257766857182,0,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,2.15930513953535,0.609589624911347,0,0,0,0,0,0,0,0.11294608203896,0,0,1.15761237161917,0,0.940634592723046,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0.134704106029175,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.269605053441981,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.455173793141999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72045208577053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0.163771917510097,3.84425824164318,0,0,0,0,0,0.548257766857182,0,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,2.15930513953535,0.609589624911347,0,0,0,0,0,0,0,0.11294608203896,0,0,1.15761237161917,0,0.940634592723046,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0.134704106029175,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:70636802..70636818,+ | |short_description=p@chr17:70636802..70636818,+ | ||
}} | }} |
Latest revision as of 20:33, 25 July 2015
Short description: | p@chr17:70636802..70636818, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:70636802..70636818, + |
Coexpression cluster: | C367_papillotubular_Macrophage_clear_pharyngeal_Renal_endometrial_tubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 8.00e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 1.46e-50 | 1 |
extrahepatic bile duct | 1.46e-50 | 1 |
common bile duct | 1.46e-50 | 1 |
duodenal papilla | 1.46e-50 | 1 |
small intestine | 2.71e-40 | 4 |
gastrointestinal system | 5.19e-18 | 25 |
duodenum | 6.76e-18 | 2 |
intestine | 4.55e-12 | 17 |
bile duct | 1.22e-09 | 6 |
digestive system duct | 1.22e-09 | 6 |
stomach | 1.59e-07 | 8 |
food storage organ | 1.59e-07 | 8 |
biliary system | 7.48e-07 | 9 |
biliary tree | 7.48e-07 | 9 |
biliary bud | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 4.32e-26 | 2 |
signet ring cell adenocarcinoma | 5.56e-26 | 2 |
adenocarcinoma | 1.02e-18 | 25 |
gastrointestinal system cancer | 2.95e-15 | 14 |