FFCP PHASE1:Hg19::chr17:75432396..75432411,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:75432396..75432411,+ | |||
|description=CAGE_peak_at_chr17:75432396..75432411,+ | |description=CAGE_peak_at_chr17:75432396..75432411,+ | ||
|id=chr17:75432396..75432411,+ | |id=chr17:75432396..75432411,+ | ||
|ontology_enrichment_celltype=CL:0000183!6.70e-09!59;CL:0002494!1.87e-08!16;CL:0000187!7.07e-07!54 | |ontology_enrichment_celltype=CL:0000183!6.70e-09!59;CL:0002494!1.87e-08!16;CL:0000187!7.07e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0000624;1.25e-11;6!CL:0002549;1.56e-10;2!CL:0002575;4.08e-10;2!CL:0002195;1.52e-09;2!CL:0002571;1.52e-09;2!CL:0000148;2.10e-07;10!CL:0000632;3.14e-07;3!CL:0000746;3.14e-07;3!CL:0002494;6.98e-07;16!CL:0000784;7.04e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.37e-11,6;CL:0002549,1.27e-10,2;CL:0002575,3.66e-10,2;CL:0002195,1.17e-09,2;CL:0002571,1.17e-09,2;CL:0000148,1.36e-07,10;CL:0000541,1.36e-07,10;CL:0000746,3.40e-07,3;CL:0000513,3.40e-07,3;CL:0000632,3.61e-07,3;CL:0002494,7.33e-07,16;CL:0000784,7.38e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000513;3.14e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!9.03e-11!27;UBERON:0000948!3.35e-10!24;UBERON:0005498!3.35e-10!24;UBERON:0004140!3.35e-10!24;UBERON:0009881!3.35e-10!24;UBERON:0004141!3.35e-10!24;UBERON:0003084!3.35e-10!24;UBERON:0007005!3.35e-10!24;UBERON:0004139!3.35e-10!24;UBERON:0004291!3.35e-10!24;UBERON:0001009!2.29e-08!113;UBERON:0004535!7.82e-08!110 | |ontology_enrichment_uberon=UBERON:0007100!9.03e-11!27;UBERON:0000948!3.35e-10!24;UBERON:0005498!3.35e-10!24;UBERON:0004140!3.35e-10!24;UBERON:0009881!3.35e-10!24;UBERON:0004141!3.35e-10!24;UBERON:0003084!3.35e-10!24;UBERON:0007005!3.35e-10!24;UBERON:0004139!3.35e-10!24;UBERON:0004291!3.35e-10!24;UBERON:0001009!2.29e-08!113;UBERON:0004535!7.82e-08!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0005629;1.56e-10;2!UBERON:0005358;1.56e-10;2!UBERON:0001886;1.56e-10;2!UBERON:0004086;1.56e-10;2!UBERON:0005282;1.56e-10;2!UBERON:0005281;1.56e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,1.27e-10,2;UBERON:0005358,1.27e-10,2;UBERON:0001886,1.27e-10,2;UBERON:0004086,1.27e-10,2;UBERON:0005282,1.27e-10,2;UBERON:0005281,1.27e-10,2;UBERON:0004535,6.75e-08,109;UBERON:0001009,1.37e-07,112 | |||
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| ||
|short_description=p@chr17:75432396..75432411,+ | |short_description=p@chr17:75432396..75432411,+ | ||
}} | }} |
Latest revision as of 21:43, 25 July 2015
Short description: | p@chr17:75432396..75432411, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:75432396..75432411, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.37e-11 | 6 |
fibroblast of choroid plexus | 1.27e-10 | 2 |
central nervous system pericyte | 3.66e-10 | 2 |
hepatic stem cell | 1.17e-09 | 2 |
hepatic mesenchymal stem cell | 1.17e-09 | 2 |
melanocyte | 1.36e-07 | 10 |
melanoblast | 1.36e-07 | 10 |
cardiac muscle cell | 3.40e-07 | 3 |
cardiac muscle myoblast | 3.40e-07 | 3 |
hepatic stellate cell | 3.61e-07 | 3 |
cardiocyte | 7.33e-07 | 16 |
plasmacytoid dendritic cell | 7.38e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 1.27e-10 | 2 |
ventricle of nervous system | 1.27e-10 | 2 |
choroid plexus | 1.27e-10 | 2 |
brain ventricle | 1.27e-10 | 2 |
ventricular system of brain | 1.27e-10 | 2 |
ventricular system of central nervous system | 1.27e-10 | 2 |
cardiovascular system | 6.75e-08 | 109 |
circulatory system | 1.37e-07 | 112 |