FFCP PHASE1:Hg19::chr18:37550388..37550448,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:37550388..37550448,+ | |||
|description=CAGE_peak_at_chr18:37550388..37550448,+ | |||
|id=chr18:37550388..37550448,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.68e-43!24;CL:0000115!2.04e-40!35;CL:0000071!1.49e-32!18;CL:0002546!1.49e-32!18;CL:0002078!4.57e-30!44;CL:0000222!4.78e-27!119;CL:0000213!5.64e-21!57;CL:0000215!5.64e-21!57;CL:1000413!2.07e-17!9;CL:0000220!1.05e-13!246;CL:0002321!1.87e-13!248;CL:0002544!3.12e-12!6;CL:0005020!3.17e-12!6;CL:0002138!3.17e-12!6;CL:0005022!3.17e-12!6;CL:0002543!2.63e-11!6;CL:0002371!5.46e-11!591;CL:0000359!5.70e-11!32;CL:0002551!2.20e-10!6;CL:0000055!3.14e-10!180;CL:0000680!2.76e-09!57;CL:0000056!2.76e-09!57;CL:0000355!2.76e-09!57;CL:0000144!6.99e-09!625;CL:0000076!5.22e-08!62;CL:0000057!6.08e-08!75;CL:0000183!9.17e-08!59;CL:0000192!2.45e-07!42;CL:0000514!2.45e-07!42;CL:0002144!4.14e-07!3;CL:0000187!4.60e-07!54;CL:0000548!6.17e-07!679;CL:0000004!6.17e-07!679;CL:0000255!6.17e-07!679;CL:0000012!8.79e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.99e-73;24!CL:0000115;2.10e-56;36!CL:0000071;1.36e-54;18!CL:0002078;1.33e-33;45!CL:1000413;1.44e-28;9!CL:0000213;4.06e-24;58!CL:0000215;4.06e-24;58!CL:0002138;1.01e-19;6!CL:0002544;1.04e-19;6!CL:0002543;3.15e-18;6!CL:0002144;5.03e-11;3!CL:0002618;9.50e-10;3!CL:0000076;4.55e-09;63!CL:0002551;3.65e-08;6!CL:0002545;9.58e-08;2!CL:0002561;7.90e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.90e-73,24;CL:0000115,7.31e-68,36;CL:0000071,1.60e-54,18;CL:0002546,1.60e-54,18;CL:0002078,1.23e-52,45;CL:0000213,5.31e-39,58;CL:0000215,5.31e-39,58;CL:0000222,3.53e-33,121;CL:1000413,1.40e-28,9;CL:0002544,9.83e-20,6;CL:0005020,1.01e-19,6;CL:0002138,1.01e-19,6;CL:0005022,1.01e-19,6;CL:0002543,3.74e-18,6;CL:0000076,3.28e-15,63;CL:0002321,7.36e-14,250;CL:0002144,5.11e-11,3;CL:0002618,1.11e-09,3;CL:0002551,3.19e-08,6;CL:0002545,8.98e-08,2;CL:0002561,8.52e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;1.36e-54;18!CL:0005022;1.01e-19;6!CL:0000222;4.30e-11;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.88e-43!79;UBERON:0007798!4.88e-43!79;UBERON:0000055!9.13e-37!69;UBERON:0001986!1.49e-32!18;UBERON:0004638!1.49e-32!18;UBERON:0004852!1.49e-32!18;UBERON:0001009!2.94e-32!113;UBERON:0004535!3.05e-32!110;UBERON:0001981!3.03e-30!60;UBERON:0007500!3.03e-30!60;UBERON:0004537!3.03e-30!60;UBERON:0006965!3.03e-30!60;UBERON:0000487!1.62e-25!22;UBERON:0004872!5.00e-25!84;UBERON:0006914!9.91e-22!25;UBERON:0001637!1.97e-20!42;UBERON:0003509!1.97e-20!42;UBERON:0004572!1.97e-20!42;UBERON:0003914!2.91e-18!118;UBERON:0003915!2.07e-17!9;UBERON:0004700!2.07e-17!9;UBERON:0001917!2.07e-17!9;UBERON:0000490!3.10e-15!138;UBERON:0004573!4.80e-15!33;UBERON:0004571!4.80e-15!33;UBERON:0000914!1.07e-13!83;UBERON:0002329!1.07e-13!83;UBERON:0003077!1.07e-13!83;UBERON:0003059!1.07e-13!83;UBERON:0007282!1.07e-13!83;UBERON:0009618!1.07e-13!83;UBERON:0007285!1.07e-13!83;UBERON:0000119!3.76e-13!312;UBERON:0004290!3.64e-12!70;UBERON:0000483!4.28e-12!309;UBERON:0000947!5.46e-12!21;UBERON:0010191!5.46e-12!21;UBERON:0000477!9.25e-12!286;UBERON:0004111!4.16e-10!241;UBERON:0000486!4.52e-10!82;UBERON:0001638!1.91e-09!9;UBERON:0003920!1.91e-09!9;UBERON:0004582!1.91e-09!9;UBERON:0001473!6.96e-09!8;UBERON:0004536!6.96e-09!8;UBERON:0006558!6.96e-09!8;UBERON:0000025!2.04e-08!194;UBERON:0001134!2.70e-08!61;UBERON:0002036!2.70e-08!61;UBERON:0003082!2.70e-08!61;UBERON:0005256!2.99e-08!143;UBERON:0002385!7.48e-08!63;UBERON:0001015!7.48e-08!63;UBERON:0000383!7.48e-08!63;UBERON:0002100!1.92e-07!216;UBERON:0003081!2.21e-07!216;UBERON:0001915!4.14e-07!3;UBERON:0001982!4.14e-07!3;UBERON:0000468!5.37e-07!659;UBERON:0002465!6.92e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.36e-54;18!UBERON:0001986;1.36e-54;18!UBERON:0004852;1.36e-54;18!UBERON:0000487;9.56e-44;22!UBERON:0006914;6.85e-38;25!UBERON:0003915;1.44e-28;9!UBERON:0004700;1.44e-28;9!UBERON:0001917;1.44e-28;9!UBERON:0000490;2.35e-25;33!UBERON:0000055;5.34e-23;65!UBERON:0007500;3.30e-21;56!UBERON:0001981;3.30e-21;56!UBERON:0004537;3.30e-21;56!UBERON:0002049;3.54e-20;75!UBERON:0007798;3.54e-20;75!UBERON:0001637;9.71e-18;42!UBERON:0003509;9.71e-18;42!UBERON:0004572;9.71e-18;42!UBERON:0001473;1.36e-14;8!UBERON:0004536;1.36e-14;8!UBERON:0006558;1.36e-14;8!UBERON:0004573;6.68e-14;33!UBERON:0004571;6.68e-14;33!UBERON:0004535;1.63e-13;109!UBERON:0003914;1.95e-13;74!UBERON:0000947;6.22e-13;21!UBERON:0010191;6.22e-13;21!UBERON:0001638;6.47e-12;9!UBERON:0003920;6.47e-12;9!UBERON:0004582;6.47e-12;9!UBERON:0001009;1.38e-11;112!UBERON:0002465;1.63e-11;10!UBERON:0010523;5.03e-11;3!UBERON:0001915;5.03e-11;3!UBERON:0001982;5.03e-11;3!UBERON:0000025;4.80e-09;93!UBERON:0005800;9.58e-08;2!UBERON:0001515;9.58e-08;2!UBERON:0004111;2.77e-07;130!UBERON:0005933;7.90e-07;2!UBERON:0005942;7.90e-07;2!UBERON:0005406;7.90e-07;2!UBERON:0005932;7.90e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.60e-54,18;UBERON:0001986,1.60e-54,18;UBERON:0004852,1.60e-54,18;UBERON:0002049,9.08e-49,78;UBERON:0007798,9.08e-49,78;UBERON:0000055,1.52e-45,68;UBERON:0000487,1.09e-43,22;UBERON:0004535,4.31e-38,109;UBERON:0006914,7.69e-38,25;UBERON:0001009,8.78e-37,112;UBERON:0007500,1.18e-34,59;UBERON:0001981,1.18e-34,59;UBERON:0004537,1.18e-34,59;UBERON:0006965,1.18e-34,59;UBERON:0003915,1.40e-28,9;UBERON:0004700,1.40e-28,9;UBERON:0001917,1.40e-28,9;UBERON:0004872,3.43e-28,83;UBERON:0003914,2.11e-20,117;UBERON:0001637,1.24e-19,42;UBERON:0003509,1.24e-19,42;UBERON:0004572,1.24e-19,42;UBERON:0000490,5.46e-18,148;UBERON:0004573,4.39e-15,33;UBERON:0004571,4.39e-15,33;UBERON:0001473,1.36e-14,8;UBERON:0004536,1.36e-14,8;UBERON:0006558,1.36e-14,8;UBERON:0000947,6.45e-13,21;UBERON:0010191,6.45e-13,21;UBERON:0001638,7.22e-12,9;UBERON:0003920,7.22e-12,9;UBERON:0004582,7.22e-12,9;UBERON:0004111,1.35e-11,240;UBERON:0002465,1.64e-11,10;UBERON:0000119,2.62e-11,309;UBERON:0010523,5.11e-11,3;UBERON:0001915,5.11e-11,3;UBERON:0001982,5.11e-11,3;UBERON:0003081,1.48e-10,203;UBERON:0000483,5.54e-10,306;UBERON:0000025,6.56e-10,192;UBERON:0000926,8.73e-09,315;UBERON:0004120,8.73e-09,315;UBERON:0006603,8.73e-09,315;UBERON:0007503,7.91e-08,78;UBERON:0005800,8.98e-08,2;UBERON:0001515,8.98e-08,2;UBERON:0005406,6.12e-07,2;UBERON:0002329,7.28e-07,71;UBERON:0003059,7.28e-07,71;UBERON:0007282,7.28e-07,71;UBERON:0004290,7.28e-07,71;UBERON:0009618,7.28e-07,71;UBERON:0005933,8.52e-07,2;UBERON:0005942,8.52e-07,2;UBERON:0005932,8.52e-07,2 | |||
|phase1_expression=2.54349730978779,0.642301571672949,1.40954404095971,0,0,1.74467704820074,0,0,0,0,0,0.218441372130172,0,0,0,1.34465029290355,1.80808358407193,2.19093027116212,0.487932798790507,0,0,0,0,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,0,0,0,0,0,0,0,0.087834785693126,0,0.364295288292542,0,0,0,0,0,0,0,18.6836662924703,12.9035189265919,18.0513060835949,9.04492707078415,28.5259616622736,5.50236083880135,12.121708059135,21.190174251885,17.4325468716488,11.7152214467635,58.0074216637172,14.4451700086517,22.4537092944316,20.5891324993686,12.9622711661082,8.57277391527166,2.2452937262617,2.0270066486998,6.13266549863533,8.54339093611316,9.34328894045077,0,0,0,0,0.633152558322899,0,0,0,0,0,0.24666754841716,0,4.44545217829971,5.72116660897106,0.605429710579726,1.72852777344,0.234321431833797,0.936480230490962,3.99330275081114,0.448346041655403,2.3486899728753,2.42809416552197,2.94946694074722,2.24569588380383,0.122834317311768,0.309977343527296,0,0,0,0,0.168336113954066,0,0.831192346452549,0,0,0,13.4984297960425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,1.39310378409594,4.33127689001751,0,0,0,0,0,0,0,0,0,0,12.6217596423101,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,1.3032332212413,0,0,0,0.939269553886573,28.0070908656483,14.8155364024515,6.84914948044554,0,0,0,0,0,1.87467667973554,0.671928512795438,0.425325291727159,0.0895585227028483,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,12.110157109299,0,8.2138880119464,0,0,0,0,0,0.257207374262142,4.25547396069835,0.532844358032199,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,1.4377491329495,0,0,23.4545716801478,0.205476322550383,2.50685348535854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17480694477644,0,0,0,0,0,0,0,0.496215615637554,0.460385919864187,0,1.02511319404561,0.511707249066704,0,4.45254199334973,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0.0770153371044148,0,0,0,3.4120015221269,1.19065593693561,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0.574265537996172,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0.330569830721956,0,0,0,0,0,0,0.616067160352178,1.06461206063404,0,0,0.858749320451947,0.372158369359667,1.58189712359363,0,0,0,0,0,0,0,0,1.61745985258653,1.58510321173008,0.421258456238981,0,0,0,0,0,0,0,11.941901554342,9.64591947558278,0,0,0,0.30982349809975,0.563391205064483,0,0.589494246078727,0,0,0,0,1.51789269506286,1.39973888097993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0023291130173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.942324577501406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,68.8047755220624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03302947670128,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:37550388..37550448,+ | |||
}} |
Latest revision as of 00:49, 26 July 2015
Short description: | p@chr18:37550388..37550448, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:37550388..37550448, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.90e-73 | 24 |
endothelial cell | 7.31e-68 | 36 |
blood vessel endothelial cell | 1.60e-54 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.60e-54 | 18 |
meso-epithelial cell | 1.23e-52 | 45 |
lining cell | 5.31e-39 | 58 |
barrier cell | 5.31e-39 | 58 |
mesodermal cell | 3.53e-33 | 121 |
endothelial cell of artery | 1.40e-28 | 9 |
aortic endothelial cell | 9.83e-20 | 6 |
lymphangioblast | 1.01e-19 | 6 |
endothelial cell of lymphatic vessel | 1.01e-19 | 6 |
vascular lymphangioblast | 1.01e-19 | 6 |
vein endothelial cell | 3.74e-18 | 6 |
squamous epithelial cell | 3.28e-15 | 63 |
embryonic cell | 7.36e-14 | 250 |
capillary endothelial cell | 5.11e-11 | 3 |
endothelial cell of umbilical vein | 1.11e-09 | 3 |
fibroblast of dermis | 3.19e-08 | 6 |
thoracic aorta endothelial cell | 8.98e-08 | 2 |
outer root sheath cell | 8.52e-07 | 2 |