FFCP PHASE1:Hg19::chr19:12897222..12897231,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:12897222..12897231,+
|short_description=p@chr19:12897222..12897231,+
|description=CAGE_peak_at_chr19:12897222..12897231,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:12897222..12897231,+ | |||
|coexpression_cluster_id=C1148 | |||
|description=CAGE_peak_at_chr19:12897222..12897231,+ | |||
|id=chr19:12897222..12897231,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.40e-72!76;CL:0002057!4.99e-69!42;CL:0000860!3.56e-66!45;CL:0000557!2.93e-61!71;CL:0000738!2.77e-59!140;CL:0002009!1.53e-57!65;CL:0000839!2.08e-57!70;CL:0000763!6.07e-55!112;CL:0000049!6.07e-55!112;CL:0002194!8.73e-55!63;CL:0000576!8.73e-55!63;CL:0000040!8.73e-55!63;CL:0000559!8.73e-55!63;CL:0000037!3.47e-52!172;CL:0000566!3.47e-52!172;CL:0000988!6.22e-48!182;CL:0002032!1.95e-47!165;CL:0000837!1.95e-47!165;CL:0002031!6.51e-46!124;CL:0002087!1.88e-43!119;CL:0002393!2.50e-15!9;CL:0002397!2.50e-15!9;CL:0000134!5.20e-15!358;CL:0000094!2.34e-14!8;CL:0002320!2.85e-14!365;CL:0000219!1.07e-11!390;CL:0000081!6.52e-10!11;CL:0000048!1.05e-08!430;CL:0000034!1.13e-08!444;CL:0000723!2.73e-08!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.26e-86;33!CL:0002057;1.26e-86;33!CL:0000576;8.13e-64;48!CL:0000473;3.80e-60;39!CL:0000234;3.80e-60;39!CL:0000766;2.52e-51;69!CL:0000094;5.10e-24;8!CL:0000763;9.18e-23;100!CL:0002393;6.03e-18;6!CL:0002397;6.03e-18;6!CL:0000081;4.59e-17;11!CL:0002087;6.84e-17;104!CL:0000738;1.35e-14;136!CL:0000775;6.29e-10;3!CL:0000767;1.28e-09;3!CL:0000875;1.70e-09;3!CL:0002396;1.70e-09;3!CL:0000226;2.31e-09;3!CL:0000842;2.31e-09;3!CL:0000988;2.35e-09;177!CL:0000771;6.48e-08;2!CL:0000219;2.07e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.86e-121,42;CL:0002057,4.86e-121,42;CL:0000766,7.43e-109,72;CL:0000473,1.66e-104,48;CL:0000234,1.66e-104,48;CL:0000557,6.83e-90,67;CL:0002009,4.12e-86,61;CL:0000839,1.05e-83,66;CL:0002194,2.32e-81,59;CL:0000576,2.32e-81,59;CL:0000040,2.32e-81,59;CL:0000559,2.32e-81,59;CL:0000763,3.14e-74,108;CL:0000049,3.14e-74,108;CL:0000738,4.40e-66,136;CL:0000037,5.22e-51,168;CL:0000988,9.58e-48,177;CL:0002032,1.37e-47,161;CL:0000837,1.37e-47,161;CL:0002031,1.99e-47,120;CL:0002087,3.79e-45,115;CL:0002393,8.34e-26,9;CL:0002397,8.34e-26,9;CL:0000094,4.32e-24,8;CL:0000134,3.74e-17,354;CL:0000081,4.08e-17,11;CL:0002320,1.47e-16,361;CL:0000219,1.83e-14,386;CL:0000034,1.72e-12,441;CL:0000048,6.62e-12,427;CL:0000723,1.49e-11,433;CL:0000775,5.74e-10,3;CL:0000767,1.19e-09,3;CL:0000875,1.55e-09,3;CL:0002396,1.55e-09,3;CL:0000226,2.49e-09,3;CL:0000842,2.49e-09,3;CL:0000771,6.48e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;5.83e-86;42!CL:0000049;6.65e-20;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.43e-63!102;UBERON:0003061!1.43e-63!102;UBERON:0002193!5.64e-56!112;UBERON:0002371!1.74e-54!80;UBERON:0001474!2.22e-51!86;UBERON:0004765!4.82e-41!101;UBERON:0001434!4.82e-41!101;UBERON:0002405!5.12e-35!115;UBERON:0003081!2.45e-23!216;UBERON:0002204!1.14e-19!167;UBERON:0002384!7.63e-14!375;UBERON:0000178!2.38e-11!15;UBERON:0000179!2.38e-11!15;UBERON:0000463!2.38e-11!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.43e-16;15!UBERON:0000179;1.43e-16;15!UBERON:0000463;1.43e-16;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.23e-87,98;UBERON:0003061,1.23e-87,98;UBERON:0002193,2.21e-78,108;UBERON:0002371,5.65e-78,76;UBERON:0001474,1.82e-71,82;UBERON:0004765,4.02e-64,90;UBERON:0002405,1.08e-61,93;UBERON:0001434,1.40e-56,100;UBERON:0003081,1.10e-35,203;UBERON:0002204,3.08e-29,167;UBERON:0000926,2.57e-18,315;UBERON:0004120,2.57e-18,315;UBERON:0006603,2.57e-18,315;UBERON:0000178,1.60e-16,15;UBERON:0000179,1.60e-16,15;UBERON:0000463,1.60e-16,15;UBERON:0002384,9.55e-16,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,9.4407426443737,4.98978217526377,6.65709330259127,0,0.30120591877825,0,0,0,0.587200878669695,9.41792194504192,7.82123345133553,6.94434786290726,0.223915474239924,0,0.257575567634187,7.70610665531693,4.53451132426571,6.79235371325885,11.3890228083785,10.6903650885675,15.4853185447552,15.247696793074,10.7587496742222,17.0267205519781,19.9952494827239,21.3009945582663,31.1480919166986,16.9418105588344,5.18521685109907,17.0789848178264,18.6711174346251,7.38136762275015,22.3767994029664,7.58657990429447,4.78712778291916,6.81959600852311,10.447532590629,5.10646702222026,7.4738669879469,13.0649305933506,6.25779502104242,17.8094852658196,4.84319602106695,7.73383035573886,16.1395817594851,4.22510572623884,10.8428192982172,9.22498040236854,10.446562696624,4.95583746376971,2.4108838004562,9.9754460309437,5.37075028437543,3.83594722905731,0,0.546138611262131,0,3.84057200309856,0,0,0,0.954053754535364,0,0,0,1.32171328579026,1.12101712596307,0,0,0.786021525498329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.602300476311091,0,0,0.947109008176067,0.821127996921047,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.9916918359339,38.7780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0.858486162094873,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,40.6363106459913,4.03535869567492,34.5904267588281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,16.478154526838,2.99161459204025,12.018049889645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48121631347465,7.33428282783297,5.01619521676188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,3.04468565539302,0,2.27858874869665,1.90585420366231,1.23408681925858,0.648473311192717,2.16012574895246,1.58625035258854,0,0,0,0,0,0,0,0,0.191505370132367,0.423347165447766,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0.223676107892416,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0,0,0,0.47748896947538,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,2.32140586367385,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0.983617892129413,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,9.4407426443737,4.98978217526377,6.65709330259127,0,0.30120591877825,0,0,0,0.587200878669695,9.41792194504192,7.82123345133553,6.94434786290726,0.223915474239924,0,0.257575567634187,7.70610665531693,4.53451132426571,6.79235371325885,11.3890228083785,10.6903650885675,15.4853185447552,15.247696793074,10.7587496742222,17.0267205519781,19.9952494827239,21.3009945582663,31.1480919166986,16.9418105588344,5.18521685109907,17.0789848178264,18.6711174346251,7.38136762275015,22.3767994029664,7.58657990429447,4.78712778291916,6.81959600852311,10.447532590629,5.10646702222026,7.4738669879469,13.0649305933506,6.25779502104242,17.8094852658196,4.84319602106695,7.73383035573886,16.1395817594851,4.22510572623884,10.8428192982172,9.22498040236854,10.446562696624,4.95583746376971,2.4108838004562,9.9754460309437,5.37075028437543,3.83594722905731,0,0.546138611262131,0,3.84057200309856,0,0,0,0.954053754535364,0,0,0,1.32171328579026,1.12101712596307,0,0,0.786021525498329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.602300476311091,0,0,0.947109008176067,0.821127996921047,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.9916918359339,38.7780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0.858486162094873,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,40.6363106459913,4.03535869567492,34.5904267588281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,16.478154526838,2.99161459204025,12.018049889645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48121631347465,7.33428282783297,5.01619521676188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,3.04468565539302,0,2.27858874869665,1.90585420366231,1.23408681925858,0.648473311192717,2.16012574895246,1.58625035258854,0,0,0,0,0,0,0,0,0.191505370132367,0.423347165447766,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0.223676107892416,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0,0,0,0.47748896947538,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,2.32140586367385,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0.983617892129413,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:12897222..12897231,+ | |||
}} | }} |
Latest revision as of 03:47, 26 July 2015
Short description: | p@chr19:12897222..12897231, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:12897222..12897231, + |
Coexpression cluster: | C1148_CD14_Eosinophils_Mast_Neutrophils_CD14CD16_blood_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.23e-87 | 98 |
blood island | 1.23e-87 | 98 |
hemolymphoid system | 2.21e-78 | 108 |
bone marrow | 5.65e-78 | 76 |
bone element | 1.82e-71 | 82 |
skeletal element | 4.02e-64 | 90 |
immune system | 1.08e-61 | 93 |
skeletal system | 1.40e-56 | 100 |
lateral plate mesoderm | 1.10e-35 | 203 |
musculoskeletal system | 3.08e-29 | 167 |
mesoderm | 2.57e-18 | 315 |
mesoderm-derived structure | 2.57e-18 | 315 |
presumptive mesoderm | 2.57e-18 | 315 |
blood | 1.60e-16 | 15 |
haemolymphatic fluid | 1.60e-16 | 15 |
organism substance | 1.60e-16 | 15 |
connective tissue | 9.55e-16 | 371 |