FFCP PHASE1:Hg19::chr19:18718144..18718158,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:18718144..18718158,+ | |||
|coexpression_cluster_id=C731 | |||
|description=CAGE_peak_at_chr19:18718144..18718158,+ | |description=CAGE_peak_at_chr19:18718144..18718158,+ | ||
|id=chr19:18718144..18718158,+ | |id=chr19:18718144..18718158,+ | ||
|ontology_enrichment_celltype=CL:0000136!9.68e-15!15;CL:0002615!3.45e-12!3;CL:0002580!7.89e-12!3;CL:0002579!9.09e-12!3;CL:0002334!1.51e-10!12;CL:0000153!1.07e-09!9;CL:0000447!1.07e-09!9;CL:0002617!1.15e-08!2;CL:0002195!7.51e-08!2;CL:0002571!7.51e-08!2 | |ontology_enrichment_celltype=CL:0000136!9.68e-15!15;CL:0002615!3.45e-12!3;CL:0002580!7.89e-12!3;CL:0002579!9.09e-12!3;CL:0002334!1.51e-10!12;CL:0000153!1.07e-09!9;CL:0000447!1.07e-09!9;CL:0002617!1.15e-08!2;CL:0002195!7.51e-08!2;CL:0002571!7.51e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.13e-57;13!CL:0002615;5.98e-47;3!CL:0002617;5.80e-32;2!CL:0002580;4.45e-21;3!CL:0002579;6.05e-21;3!CL:0002334;2.36e-20;12!CL:0002616;9.58e-17;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.12e-49,15;CL:0002615,5.53e-47,3;CL:0002617,7.33e-32,2;CL:0002580,4.02e-21,3;CL:0002579,5.47e-21,3;CL:0002334,2.13e-20,12;CL:0002616,1.04e-16,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!3.28e-22!6;UBERON:0002358!3.28e-22!6;UBERON:0003684!3.28e-22!6;UBERON:0001178!3.28e-22!6;UBERON:0004457!1.18e-18!12;UBERON:0000042!1.18e-18!12;UBERON:0009569!1.81e-09!113;UBERON:0000310!3.49e-09!10;UBERON:0001443!2.61e-08!11;UBERON:0002417!4.84e-08!61;UBERON:0000916!4.84e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.36e-63;6!UBERON:0002358;2.36e-63;6!UBERON:0003684;2.36e-63;6!UBERON:0001178;2.36e-63;6!UBERON:0004457;2.42e-42;9!UBERON:0000042;2.42e-42;9!UBERON:0000310;8.97e-25;10!UBERON:0001443;1.46e-22;11!UBERON:0001013;1.84e-10;14!UBERON:0005406;4.89e-09;2!UBERON:0002323;7.19e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.95e-63,6;UBERON:0002358,1.95e-63,6;UBERON:0003684,1.95e-63,6;UBERON:0001178,1.95e-63,6;UBERON:0004457,7.34e-32,12;UBERON:0000042,7.34e-32,12;UBERON:0000310,9.25e-25,10;UBERON:0001443,1.50e-22,11;UBERON:0001013,1.78e-10,14;UBERON:0009569,2.79e-10,112;UBERON:0005406,5.08e-09,2;UBERON:0002323,2.35e-08,46;UBERON:0004458,7.69e-08,49;UBERON:0003886,4.14e-07,54 | |||
|phase1_expression=20.3479784783023,3.42560838225573,12.1220787522535,6.00439790118782,3.5756887554183,3.48935409640147,2.53299878168311,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.579386075843295,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.515281080091258,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,3.57656445851882,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0,0,0,0,0,0,0,0,2.97729369382532,2.30192959932094,0.841980283299221,2.81906128362542,1.02341449813341,0.804269605718038,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0.472699093843342,0.164831716762333,0.404421263125109,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0,0,0,0,0,0,0,0,0.788857810965923,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0.275684698604535,0,0,0,0,0,0,0,0,0,0,0.25458863311266,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 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|phase1_expression=20.3479784783023,3.42560838225573,12.1220787522535,6.00439790118782,3.5756887554183,3.48935409640147,2.53299878168311,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.579386075843295,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.515281080091258,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,3.57656445851882,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0,0,0,0,0,0,0,0,2.97729369382532,2.30192959932094,0.841980283299221,2.81906128362542,1.02341449813341,0.804269605718038,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0.472699093843342,0.164831716762333,0.404421263125109,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0,0,0,0,0,0,0,0,0.788857810965923,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0.275684698604535,0,0,0,0,0,0,0,0,0,0,0.25458863311266,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:18718144..18718158,+ | |short_description=p@chr19:18718144..18718158,+ | ||
}} | }} |
Latest revision as of 05:16, 26 July 2015
Short description: | p@chr19:18718144..18718158, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18718144..18718158, + |
Coexpression cluster: | C731_Adipocyte_Preadipocyte_adipose_Wilms_salivary_Mesenchymal_epididymis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.12e-49 | 15 |
adipocyte of omentum tissue | 5.53e-47 | 3 |
adipocyte of breast | 7.33e-32 | 2 |
preadipocyte of the breast | 4.02e-21 | 3 |
omentum preadipocyte | 5.47e-21 | 3 |
preadipocyte | 2.13e-20 | 12 |
perirenal adipocyte cell | 1.04e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.95e-63 | 6 |
peritoneum | 1.95e-63 | 6 |
abdominal cavity | 1.95e-63 | 6 |
visceral peritoneum | 1.95e-63 | 6 |
cavity lining | 7.34e-32 | 12 |
serous membrane | 7.34e-32 | 12 |
breast | 9.25e-25 | 10 |
chest | 1.50e-22 | 11 |
adipose tissue | 1.78e-10 | 14 |
subdivision of trunk | 2.79e-10 | 112 |
perirenal fat | 5.08e-09 | 2 |
body cavity | 2.35e-08 | 46 |
body cavity or lining | 7.69e-08 | 49 |
body cavity precursor | 4.14e-07 | 54 |