FFCP PHASE1:Hg19::chr19:19258534..19258541,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:19258534..19258541,- | |||
|coexpression_cluster_id=C442 | |coexpression_cluster_id=C442 | ||
|description=CAGE_peak_at_chr19:19258534..19258541,- | |description=CAGE_peak_at_chr19:19258534..19258541,- | ||
|id=chr19:19258534..19258541,- | |id=chr19:19258534..19258541,- | ||
|ontology_enrichment_celltype=CL:0000945!4.96e-08!24;CL:0000826!4.96e-08!24 | |ontology_enrichment_celltype=CL:0000945!4.96e-08!24;CL:0000826!4.96e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.83e-37;24!CL:0000785;3.15e-26;1!CL:0000819;3.15e-26;1!CL:0000542;5.68e-12;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.83e-37,24;CL:0000826,3.83e-37,24;CL:0000819,2.78e-26,1;CL:0000838,2.74e-17,52;CL:0000542,5.76e-17,53;CL:0000051,5.76e-17,53;CL:0000785,7.30e-14,2;CL:0000955,7.30e-14,2;CL:0000818,7.30e-14,2;CL:0000954,7.30e-14,2;CL:0000816,7.30e-14,2;CL:0000817,1.10e-09,3;CL:0002087,8.54e-08,115;CL:0002031,1.80e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0001045;7.62e-26;1!CL:0000954;7.77e-14;2!CL:0000051;5.68e-12;53 | |||
|ontology_enrichment_disease=DOID:0060058!5.35e-08!10 | |ontology_enrichment_disease=DOID:0060058!5.35e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;4.29e-40;10!DOID:0060073;3.15e-26;1!DOID:8675;3.15e-26;1!DOID:4960;7.62e-26;1!DOID:0070004;7.62e-26;1!DOID:2531;5.32e-08;51!DOID:0060083;5.32e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.51e-40,10;DOID:0060073,2.78e-26,1;DOID:8675,2.78e-26,1;DOID:4960,1.26e-25,1;DOID:0070004,1.26e-25,1;DOID:2531,1.89e-12,51;DOID:0060083,1.89e-12,51 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;7.62e-26;1!UBERON:0001153;7.62e-26;1!UBERON:0009854;7.62e-26;1!UBERON:0009856;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,5.93e-26,1;UBERON:0001153,5.93e-26,1;UBERON:0001045,5.93e-26,1 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0.458480434487708,0.410502947249729,0.236132343941038,0,0,0.154816123316076,0,0,0,2.55641761914995,1.70603078984906,0,0,0,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0,0.443067789167242,0,0,0.130059347559878,0.164437904603676,0,0,0.296573126324121,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.164254312027618,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0.307160702099232,0,0.281338832821026,0,0,0,0,1.65770349318689,0,0,1.6001024709939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0.139423744278603,0.153900517007594,0,0,0.179515288819544,0.108647371922008,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,2.73682183823499,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146178634172371,0.164230914106418,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0.19980960958213,0.144090417154106,0,0.857974989309823,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0.164831716762333,0.13480708770837,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0.164185041498678,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,4.14094834495046,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0.235265819698172,0.468334905806882,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0,0,0,0.31020638566432,0,0,0,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0.199882311849858,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0.250707539292375,0.151557396436479,0,0,0.413731983447581,0,0.476128862927481,0,0.186224142887574,0,0,0,0.217716747896961,0,0.404112318087525,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0.458480434487708,0.410502947249729,0.236132343941038,0,0,0.154816123316076,0,0,0,2.55641761914995,1.70603078984906,0,0,0,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0,0.443067789167242,0,0,0.130059347559878,0.164437904603676,0,0,0.296573126324121,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.164254312027618,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0.307160702099232,0,0.281338832821026,0,0,0,0,1.65770349318689,0,0,1.6001024709939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0.139423744278603,0.153900517007594,0,0,0.179515288819544,0.108647371922008,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,2.73682183823499,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146178634172371,0.164230914106418,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0.19980960958213,0.144090417154106,0,0.857974989309823,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0.164831716762333,0.13480708770837,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0.164185041498678,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,4.14094834495046,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0.235265819698172,0.468334905806882,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0,0,0,0.31020638566432,0,0,0,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0.199882311849858,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0.250707539292375,0.151557396436479,0,0,0.413731983447581,0,0.476128862927481,0,0.186224142887574,0,0,0,0.217716747896961,0,0.404112318087525,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | ||
|short_description=p@chr19:19258534..19258541,- | |short_description=p@chr19:19258534..19258541,- | ||
}} | }} |
Latest revision as of 05:27, 26 July 2015
Short description: | p@chr19:19258534..19258541, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:19258534..19258541, - |
Coexpression cluster: | C442_diffuse_xeroderma_lymphoma_Burkitt_plasma_b_lymphangiectasia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.83e-37 | 24 |
pro-B cell | 3.83e-37 | 24 |
B-1 B cell | 2.78e-26 | 1 |
lymphoid lineage restricted progenitor cell | 2.74e-17 | 52 |
lymphocyte | 5.76e-17 | 53 |
common lymphoid progenitor | 5.76e-17 | 53 |
mature B cell | 7.30e-14 | 2 |
pre-B-II cell | 7.30e-14 | 2 |
transitional stage B cell | 7.30e-14 | 2 |
small pre-B-II cell | 7.30e-14 | 2 |
immature B cell | 7.30e-14 | 2 |
precursor B cell | 1.10e-09 | 3 |
nongranular leukocyte | 8.54e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.80e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 5.93e-26 | 1 |
caecum | 5.93e-26 | 1 |
midgut | 5.93e-26 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.51e-40 | 10 |
lymphatic system cancer | 2.78e-26 | 1 |
lymphosarcoma | 2.78e-26 | 1 |
bone marrow cancer | 1.26e-25 | 1 |
myeloma | 1.26e-25 | 1 |
hematologic cancer | 1.89e-12 | 51 |
immune system cancer | 1.89e-12 | 51 |