FFCP PHASE1:Hg19::chr19:34787674..34787690,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-29bp_to_ENST00000431093_5end | |association_with_transcript=-29bp_to_ENST00000431093_5end | ||
|cluster_id=chr19:34787674..34787690,- | |||
|coexpression_cluster_id=C3775 | |||
|description=CAGE_peak_1_at_ENST00000431093_5end | |description=CAGE_peak_1_at_ENST00000431093_5end | ||
|id=chr19:34787674..34787690,- | |id=chr19:34787674..34787690,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002600;1.57e-37;2!CL:0002599;1.08e-19;1!CL:0002549;2.60e-10;2!CL:0002363;2.60e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002600,1.57e-37,2;CL:0002599,1.08e-19,1;CL:0002549,2.72e-10,2;CL:0002363,3.58e-10,2;CL:0000008,3.58e-10,2;CL:0000192,4.02e-07,43;CL:0000514,4.02e-07,43 | |||
|ontology_enrichment_development_v019=CL:0000008;2.60e-10;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003126;1.77e-11;7!UBERON:0001005;1.77e-11;7!UBERON:0003566;2.60e-10;2!UBERON:0005629;2.60e-10;2!UBERON:0005358;2.60e-10;2!UBERON:0001777;2.60e-10;2!UBERON:0001886;2.60e-10;2!UBERON:0004086;2.60e-10;2!UBERON:0005282;2.60e-10;2!UBERON:0005281;2.60e-10;2!UBERON:0001043;1.93e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.77e-11,7;UBERON:0001005,1.77e-11,7;UBERON:0005629,2.72e-10,2;UBERON:0005358,2.72e-10,2;UBERON:0001886,2.72e-10,2;UBERON:0004086,2.72e-10,2;UBERON:0005282,2.72e-10,2;UBERON:0005281,2.72e-10,2;UBERON:0003566,3.58e-10,2;UBERON:0001777,3.58e-10,2;UBERON:0001043,1.93e-07,3;UBERON:0009143,1.93e-07,3 | |||
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| ||
|short_description=p1@ENST00000431093 | |short_description=p1@ENST00000431093 | ||
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Latest revision as of 06:22, 26 July 2015
Short description: | p1@ENST00000431093 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000431093_5end |
Coexpression cluster: | C3775_Smooth_nasal_Mesenchymal_CD34_Aortic_MCF7_Lymphatic |
Association with transcript: | -29bp_to_ENST00000431093_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of trachea | 1.57e-37 | 2 |
smooth muscle cell of the esophagus | 1.08e-19 | 1 |
fibroblast of choroid plexus | 2.72e-10 | 2 |
keratocyte | 3.58e-10 | 2 |
migratory cranial neural crest cell | 3.58e-10 | 2 |
smooth muscle cell | 4.02e-07 | 43 |
smooth muscle myoblast | 4.02e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.77e-11 | 7 |
respiratory airway | 1.77e-11 | 7 |
vascular plexus | 2.72e-10 | 2 |
ventricle of nervous system | 2.72e-10 | 2 |
choroid plexus | 2.72e-10 | 2 |
brain ventricle | 2.72e-10 | 2 |
ventricular system of brain | 2.72e-10 | 2 |
ventricular system of central nervous system | 2.72e-10 | 2 |
head connective tissue | 3.58e-10 | 2 |
substantia propria of cornea | 3.58e-10 | 2 |
esophagus | 1.93e-07 | 3 |
esophageal region | 1.93e-07 | 3 |