FFCP PHASE1:Hg19::chr19:3544836..3544874,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:3544836..3544874,- | |||
|coexpression_cluster_id=C327 | |||
|description=CAGE_peak_at_chr19:3544836..3544874,- | |||
|id=chr19:3544836..3544874,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.33e-19;10!CL:0002567;8.06e-18;3!CL:0000147;1.16e-13;14!CL:0000710;2.23e-09;20!CL:0000075;8.75e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.71e-19,10;CL:0000541,2.71e-19,10;CL:0002567,8.11e-18,3;CL:0000147,1.29e-13,14;CL:0000710,2.39e-09,20;CL:0000075,9.20e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.55e-08;3!UBERON:0003057;4.55e-08;3!UBERON:0006601;2.30e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.54e-23!57;UBERON:0005068!7.54e-23!57;UBERON:0006241!7.54e-23!57;UBERON:0007135!7.54e-23!57;UBERON:0000955!2.52e-19!69;UBERON:0006238!2.52e-19!69;UBERON:0002780!8.74e-19!41;UBERON:0001890!8.74e-19!41;UBERON:0006240!8.74e-19!41;UBERON:0002616!1.23e-18!59;UBERON:0003080!4.54e-18!42;UBERON:0005743!6.13e-18!86;UBERON:0001017!7.16e-18!82;UBERON:0002020!2.96e-16!34;UBERON:0003528!2.96e-16!34;UBERON:0001893!3.49e-16!34;UBERON:0007023!5.05e-16!115;UBERON:0000073!1.13e-15!94;UBERON:0001016!1.13e-15!94;UBERON:0002346!1.22e-15!90;UBERON:0003075!1.79e-15!86;UBERON:0007284!1.79e-15!86;UBERON:0002791!2.65e-15!33;UBERON:0001869!2.94e-14!32;UBERON:0003056!2.34e-11!61;UBERON:0002619!3.74e-11!22;UBERON:0000956!3.47e-10!25;UBERON:0000203!3.47e-10!25;UBERON:0001950!2.49e-09!20;UBERON:0000153!1.39e-08!129;UBERON:0007811!1.39e-08!129;UBERON:0000033!2.57e-08!123;UBERON:0002308!4.75e-08!9;UBERON:0000125!4.75e-08!9;UBERON:0000200!9.01e-08!6;UBERON:0000924!9.50e-08!173;UBERON:0006601!9.50e-08!173;UBERON:0002298!1.26e-07!8;UBERON:0004121!1.71e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.82e-22;53!UBERON:0002616;3.82e-22;53!UBERON:0002298;5.79e-22;6!UBERON:0001893;1.40e-21;34!UBERON:0000200;2.15e-21;6!UBERON:0003528;5.54e-21;34!UBERON:0002020;5.54e-21;34!UBERON:0002780;3.64e-20;41!UBERON:0001890;3.64e-20;41!UBERON:0002791;1.85e-17;32!UBERON:0001869;2.40e-17;32!UBERON:0002619;4.70e-17;22!UBERON:0000988;1.78e-16;3!UBERON:0000125;3.38e-15;9!UBERON:0002308;3.38e-15;9!UBERON:0000956;6.52e-15;25!UBERON:0000203;6.52e-15;25!UBERON:0004732;4.14e-14;13!UBERON:0001017;2.60e-12;75!UBERON:0001875;2.92e-12;2!UBERON:0006514;2.92e-12;2!UBERON:0001897;6.83e-12;2!UBERON:0010225;6.83e-12;2!UBERON:0001016;7.50e-12;83!UBERON:0001954;1.11e-11;2!UBERON:0002148;1.11e-11;2!UBERON:0005162;1.11e-11;2!UBERON:0000122;1.11e-11;2!UBERON:0006331;1.11e-11;2!UBERON:0009662;1.11e-11;2!UBERON:0003022;1.11e-11;2!UBERON:0002421;1.11e-11;2!UBERON:0002600;1.11e-11;2!UBERON:0001950;2.05e-11;20!UBERON:0002771;2.47e-11;2!UBERON:0004733;6.99e-11;12!UBERON:0002028;6.99e-11;12!UBERON:0000955;7.76e-11;68!UBERON:0001872;4.32e-10;5!UBERON:0001896;4.55e-08;3!UBERON:0002240;4.55e-08;3!UBERON:0005174;4.55e-08;3!UBERON:0005290;4.55e-08;3!UBERON:0001137;4.55e-08;3!UBERON:0009663;8.33e-08;7!UBERON:0002038;4.58e-07;1!UBERON:0009661;4.58e-07;1!UBERON:0002950;4.58e-07;1!UBERON:0001891;4.58e-07;1!UBERON:0002336;7.59e-07;1!UBERON:0011215;7.59e-07;1!UBERON:0001018;7.59e-07;1!UBERON:0002473;7.59e-07;1!UBERON:0005340;7.59e-07;1!UBERON:0003544;7.59e-07;1!UBERON:0005970;7.59e-07;1!UBERON:0002316;7.59e-07;1!UBERON:0001020;7.59e-07;1!UBERON:0002437;7.59e-07;1!UBERON:0007023;9.34e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.11e-44,56;UBERON:0005068,1.11e-44,56;UBERON:0006241,1.11e-44,56;UBERON:0007135,1.11e-44,56;UBERON:0000073,3.62e-39,53;UBERON:0002616,3.62e-39,53;UBERON:0000955,3.26e-32,68;UBERON:0006238,3.26e-32,68;UBERON:0001017,6.30e-32,81;UBERON:0003075,6.50e-32,82;UBERON:0007284,6.50e-32,82;UBERON:0001016,6.10e-31,89;UBERON:0002346,3.33e-30,86;UBERON:0002780,3.18e-29,41;UBERON:0001890,3.18e-29,41;UBERON:0003080,3.18e-29,41;UBERON:0006240,3.18e-29,41;UBERON:0003528,3.36e-27,34;UBERON:0002020,3.36e-27,34;UBERON:0001893,5.41e-27,34;UBERON:0010371,2.03e-26,104;UBERON:0002298,2.75e-22,6;UBERON:0007023,8.59e-22,114;UBERON:0000200,1.40e-21,6;UBERON:0003056,3.13e-21,61;UBERON:0002791,4.78e-21,32;UBERON:0001869,8.97e-21,32;UBERON:0010314,1.04e-19,132;UBERON:0002619,3.65e-17,22;UBERON:0000988,8.95e-17,3;UBERON:0003076,1.27e-16,15;UBERON:0003057,1.27e-16,15;UBERON:0004121,1.29e-16,171;UBERON:0000924,1.29e-16,171;UBERON:0006601,1.29e-16,171;UBERON:0000125,2.21e-15,9;UBERON:0002308,2.21e-15,9;UBERON:0000956,5.23e-15,25;UBERON:0000203,5.23e-15,25;UBERON:0004732,2.53e-14,13;UBERON:0001875,3.01e-12,2;UBERON:0006514,3.01e-12,2;UBERON:0001897,4.43e-12,2;UBERON:0010225,4.43e-12,2;UBERON:0002148,5.22e-12,2;UBERON:0006331,5.22e-12,2;UBERON:0009662,5.22e-12,2;UBERON:0005162,8.98e-12,2;UBERON:0000122,8.98e-12,2;UBERON:0001954,1.06e-11,2;UBERON:0003022,1.06e-11,2;UBERON:0002421,1.06e-11,2;UBERON:0002600,1.06e-11,2;UBERON:0002771,1.11e-11,2;UBERON:0001950,1.68e-11,20;UBERON:0004733,4.88e-11,12;UBERON:0002028,4.88e-11,12;UBERON:0007277,4.88e-11,12;UBERON:0011216,2.64e-10,223;UBERON:0001872,6.50e-10,5;UBERON:0000025,1.20e-09,192;UBERON:0001896,3.95e-08,3;UBERON:0005290,3.95e-08,3;UBERON:0010096,3.95e-08,3;UBERON:0002240,5.25e-08,3;UBERON:0005174,5.25e-08,3;UBERON:0001137,5.25e-08,3;UBERON:0009663,8.26e-08,7;UBERON:0004111,1.42e-07,240;UBERON:0002038,4.33e-07,1;UBERON:0009661,4.33e-07,1;UBERON:0002950,4.33e-07,1;UBERON:0001891,4.33e-07,1;UBERON:0009616,4.33e-07,1;UBERON:0010286,4.33e-07,1;UBERON:0002336,7.60e-07,1;UBERON:0011215,7.60e-07,1;UBERON:0001018,7.60e-07,1;UBERON:0002473,7.60e-07,1;UBERON:0005340,7.60e-07,1;UBERON:0003544,7.60e-07,1;UBERON:0005970,7.60e-07,1;UBERON:0002316,7.60e-07,1;UBERON:0001020,7.60e-07,1;UBERON:0002437,7.60e-07,1 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,1.26343974685366,0.261185628199839,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0.164201178899891,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0,0.223915474239924,0,0,0.145398238779565,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0.659702600373432,0,0.426224750532694,0,0.56738522469114,0.622822248995575,0.502497330513487,0,0.217188844705117,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.649094787309367,0.348259474598534,1.06366368415092,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0.113432183160021,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0,0,0,0,0,1.38134921352481,0,0,0.473227200159376,1.01150814046861,0,0.441175890929576,0.217879444092406,0,0,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0.288732895522148,0.462985512576611,0,0,0,0.246217006087397,0.936017060556951,0.445893486866185,0,0,0,0,0,0.383382679165211,0,0,0,0,0,1.33345578013555,5.34783795781589,16.4104426094066,6.84289784090821,4.8328921570562,0.600686115687835,1.14330573052231,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0.542530047399471,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0.355123450626254,0,0,0.116210378459959,0,0.200506470303285,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,1.48428957058962,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0.110579259931225,0,0.438770794307945,0.21787692703798,0,0,0,0,0.179515288819544,0,0.638002319463839,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0,0,0.216388639742091,0,0,0,0,0,0,2.6286441862464,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0.774050650312681,0.219267951258557,0.492692742319255,0,0,0,0,0,0.823040347426423,0,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0.209205692624666,0.101998217636322,0,4.20294202096853,3.28572909340783,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,2.38568906942791,1.36203406111576,0,0,0,0.449947783103001,0,0.485996453264197,0,0.236417121897595,0.157363764404994,0,0.179287339332845,0,0,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0,0,0,1.80996138906171,2.90911723833918,0,0,0.106787412567695,0,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0.886068179966986,1.46431517882356,1.502291168478,0.573409195690071,2.10765197920019,1.4903136705932,0,0,0.606596470166591,0.856396000634902,0,0.468334905806882,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0.489473409012935,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0.607719912354764,1.65910123382077,0.389720617678777,0.531459361253452,0.654261577023377,0,0.245772908753719,0.422624246717254,0,0,0.172214979660816,0,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.770750701157514,0,2.71377560397157,0.205116364240755,0,0.414943514785307,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01306376927592,0,2.27355476151302,1.07806877329642,0,0,0,0.175871244359621,0,0.535701835878287,0,0,0.227662191351298,0.0887023701626388,0,0,1.22345519358297,1.18390992413128,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.198950775161368,0,0.11294608203896,0,0,0.231522474323834,0,0.4703172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| |||
|short_description=p@chr19:3544836..3544874,- | |||
}} |
Latest revision as of 06:26, 26 July 2015
Short description: | p@chr19:3544836..3544874, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:3544836..3544874, - |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.71e-19 | 10 |
melanoblast | 2.71e-19 | 10 |
light melanocyte | 8.11e-18 | 3 |
pigment cell | 1.29e-13 | 14 |
neurecto-epithelial cell | 2.39e-09 | 20 |
columnar/cuboidal epithelial cell | 9.20e-07 | 27 |