FFCP PHASE1:Hg19::chr19:38993559..38993562,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:38993559..38993562,- | |||
|description=CAGE_peak_at_chr19:38993559..38993562,- | |description=CAGE_peak_at_chr19:38993559..38993562,- | ||
|id=chr19:38993559..38993562,- | |id=chr19:38993559..38993562,- | ||
|ontology_enrichment_celltype=CL:0000066!1.02e-07!254 | |ontology_enrichment_celltype=CL:0000066!1.02e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.35e-07;7!CL:0000586;3.35e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.43e-07,7;CL:0000586,4.43e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.24e-10;10!UBERON:0005564;1.24e-10;10 | |||
|ontology_enrichment_disease=DOID:162!2.47e-37!235;DOID:14566!5.05e-36!239;DOID:0050687!1.16e-34!143;DOID:305!6.48e-32!106;DOID:0050686!7.83e-19!137;DOID:299!3.66e-11!25;DOID:1749!4.35e-11!14;DOID:1036!5.86e-10!8;DOID:7!4.82e-07!39 | |ontology_enrichment_disease=DOID:162!2.47e-37!235;DOID:14566!5.05e-36!239;DOID:0050687!1.16e-34!143;DOID:305!6.48e-32!106;DOID:0050686!7.83e-19!137;DOID:299!3.66e-11!25;DOID:1749!4.35e-11!14;DOID:1036!5.86e-10!8;DOID:7!4.82e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:2355;2.46e-12;1!DOID:74;8.52e-07;2!DOID:4074;8.52e-07;2!DOID:4905;8.52e-07;2!DOID:3498;8.52e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,2.75e-12,1;DOID:7,5.54e-07,39;DOID:4074,7.20e-07,2;DOID:4905,7.20e-07,2;DOID:3498,7.20e-07,2;DOID:74,9.02e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002114!4.41e-08!12;UBERON:0000473!9.70e-08!8;UBERON:0004458!5.51e-07!49;UBERON:0002323!9.00e-07!46;UBERON:0002108!9.07e-07!14 | |ontology_enrichment_uberon=UBERON:0002114!4.41e-08!12;UBERON:0000473!9.70e-08!8;UBERON:0004458!5.51e-07!49;UBERON:0002323!9.00e-07!46;UBERON:0002108!9.07e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001264;5.68e-18;10!UBERON:0000473;3.78e-13;8!UBERON:0003343;3.75e-12;4!UBERON:0004785;3.75e-12;4!UBERON:0002075;4.25e-10;18!UBERON:0003135;1.03e-09;11!UBERON:0002323;3.84e-09;45!UBERON:0000974;2.13e-08;6!UBERON:0003101;2.56e-08;22!UBERON:0000079;2.56e-08;22!UBERON:0002553;6.00e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,4.09e-18,10;UBERON:0000473,5.48e-13,8;UBERON:0003343,5.10e-12,4;UBERON:0004785,5.10e-12,4;UBERON:0002323,3.52e-11,46;UBERON:0004458,1.87e-10,49;UBERON:0002075,3.56e-10,18;UBERON:0003135,1.34e-09,11;UBERON:0003886,1.99e-09,54;UBERON:0002553,2.87e-08,61;UBERON:0003101,2.99e-08,22;UBERON:0000079,2.99e-08,22 | |||
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| ||
|short_description=p@chr19:38993559..38993562,- | |short_description=p@chr19:38993559..38993562,- | ||
}} | }} |
Latest revision as of 07:21, 26 July 2015
Short description: | p@chr19:38993559..38993562, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:38993559..38993562, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.43e-07 | 7 |
germ cell | 4.43e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
pancreas | 4.09e-18 | 10 |
testis | 5.48e-13 | 8 |
mucosa of oral region | 5.10e-12 | 4 |
respiratory system mucosa | 5.10e-12 | 4 |
body cavity | 3.52e-11 | 46 |
body cavity or lining | 1.87e-10 | 49 |
viscus | 3.56e-10 | 18 |
male reproductive organ | 1.34e-09 | 11 |
body cavity precursor | 1.99e-09 | 54 |
anatomical cavity | 2.87e-08 | 61 |
male organism | 2.99e-08 | 22 |
male reproductive system | 2.99e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
anemia | 2.75e-12 | 1 |
disease of anatomical entity | 5.54e-07 | 39 |
pancreas adenocarcinoma | 7.20e-07 | 2 |
pancreatic carcinoma | 7.20e-07 | 2 |
pancreatic ductal adenocarcinoma | 7.20e-07 | 2 |
hematopoietic system disease | 9.02e-07 | 2 |