FFCP PHASE1:Hg19::chr1:111441743..111441763,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:111441743..111441763,+ | |||
|coexpression_cluster_id=C329 | |coexpression_cluster_id=C329 | ||
|description=CAGE_peak_at_chr1:111441743..111441763,+ | |description=CAGE_peak_at_chr1:111441743..111441763,+ | ||
|id=chr1:111441743..111441763,+ | |id=chr1:111441743..111441763,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.72e-78!140;CL:0000037!8.29e-75!172;CL:0000566!8.29e-75!172;CL:0002087!1.24e-73!119;CL:0000988!1.62e-72!182;CL:0002032!2.42e-70!165;CL:0000837!2.42e-70!165;CL:0002031!2.88e-67!124;CL:0000766!4.07e-50!76;CL:0002194!2.61e-46!63;CL:0000576!2.61e-46!63;CL:0000040!2.61e-46!63;CL:0000559!2.61e-46!63;CL:0000839!2.50e-44!70;CL:0002009!2.96e-44!65;CL:0000557!2.10e-43!71;CL:0002057!4.68e-43!42;CL:0000763!4.87e-43!112;CL:0000049!4.87e-43!112;CL:0000860!4.47e-39!45;CL:0000542!3.79e-23!53;CL:0000051!3.79e-23!53;CL:0000838!1.79e-22!52;CL:0000134!3.46e-17!358;CL:0002320!3.43e-16!365;CL:0000945!1.44e-13!24;CL:0000826!1.44e-13!24;CL:0000219!9.35e-13!390;CL:0000048!7.47e-09!430;CL:0000084!1.72e-08!25;CL:0000827!1.72e-08!25;CL:0000723!2.53e-08!436;CL:0000236!5.21e-08!14;CL:0000034!1.19e-07!444;CL:0000791!1.39e-07!18;CL:0000789!1.39e-07!18;CL:0002420!1.39e-07!18;CL:0002419!1.39e-07!18;CL:0000790!1.39e-07!18;CL:0000625!2.81e-07!11 | |ontology_enrichment_celltype=CL:0000738!2.72e-78!140;CL:0000037!8.29e-75!172;CL:0000566!8.29e-75!172;CL:0002087!1.24e-73!119;CL:0000988!1.62e-72!182;CL:0002032!2.42e-70!165;CL:0000837!2.42e-70!165;CL:0002031!2.88e-67!124;CL:0000766!4.07e-50!76;CL:0002194!2.61e-46!63;CL:0000576!2.61e-46!63;CL:0000040!2.61e-46!63;CL:0000559!2.61e-46!63;CL:0000839!2.50e-44!70;CL:0002009!2.96e-44!65;CL:0000557!2.10e-43!71;CL:0002057!4.68e-43!42;CL:0000763!4.87e-43!112;CL:0000049!4.87e-43!112;CL:0000860!4.47e-39!45;CL:0000542!3.79e-23!53;CL:0000051!3.79e-23!53;CL:0000838!1.79e-22!52;CL:0000134!3.46e-17!358;CL:0002320!3.43e-16!365;CL:0000945!1.44e-13!24;CL:0000826!1.44e-13!24;CL:0000219!9.35e-13!390;CL:0000048!7.47e-09!430;CL:0000084!1.72e-08!25;CL:0000827!1.72e-08!25;CL:0000723!2.53e-08!436;CL:0000236!5.21e-08!14;CL:0000034!1.19e-07!444;CL:0000791!1.39e-07!18;CL:0000789!1.39e-07!18;CL:0002420!1.39e-07!18;CL:0002419!1.39e-07!18;CL:0000790!1.39e-07!18;CL:0000625!2.81e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.81e-78;33!CL:0002057;2.81e-78;33!CL:0000473;1.45e-68;39!CL:0000234;1.45e-68;39!CL:0000576;5.94e-46;48!CL:0000766;6.45e-34;69!CL:0000763;1.01e-15;100!CL:0000738;2.41e-14;136!CL:0002087;1.37e-13;104!CL:0000775;2.48e-10;3!CL:0000235;2.15e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.29e-91,48;CL:0000234,3.29e-91,48;CL:0000860,1.49e-84,42;CL:0002057,1.49e-84,42;CL:0002194,1.25e-74,59;CL:0000576,1.25e-74,59;CL:0000040,1.25e-74,59;CL:0000559,1.25e-74,59;CL:0002009,7.07e-72,61;CL:0000766,6.74e-70,72;CL:0000839,1.04e-65,66;CL:0000557,1.38e-64,67;CL:0002087,2.05e-48,115;CL:0000738,1.43e-45,136;CL:0002031,9.00e-44,120;CL:0000763,4.35e-43,108;CL:0000049,4.35e-43,108;CL:0002032,6.20e-35,161;CL:0000837,6.20e-35,161;CL:0000037,1.33e-34,168;CL:0000988,3.14e-32,177;CL:0000775,2.45e-10,3;CL:0000134,3.78e-10,354;CL:0002320,9.98e-10,361;CL:0000219,2.98e-08,386;CL:0000235,3.07e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;7.10e-60;42!CL:0000049;2.74e-15;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.11e-51!102;UBERON:0003061!1.11e-51!102;UBERON:0002193!1.49e-47!112;UBERON:0002371!7.18e-39!80;UBERON:0001474!1.16e-34!86;UBERON:0002405!2.32e-29!115;UBERON:0004765!2.19e-27!101;UBERON:0001434!2.19e-27!101;UBERON:0002384!2.63e-15!375;UBERON:0003081!5.56e-14!216;UBERON:0000178!4.21e-10!15;UBERON:0000179!4.21e-10!15;UBERON:0000463!4.21e-10!15;UBERON:0002204!1.18e-09!167 | |ontology_enrichment_uberon=UBERON:0002390!1.11e-51!102;UBERON:0003061!1.11e-51!102;UBERON:0002193!1.49e-47!112;UBERON:0002371!7.18e-39!80;UBERON:0001474!1.16e-34!86;UBERON:0002405!2.32e-29!115;UBERON:0004765!2.19e-27!101;UBERON:0001434!2.19e-27!101;UBERON:0002384!2.63e-15!375;UBERON:0003081!5.56e-14!216;UBERON:0000178!4.21e-10!15;UBERON:0000179!4.21e-10!15;UBERON:0000463!4.21e-10!15;UBERON:0002204!1.18e-09!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.33e-56,98;UBERON:0003061,5.33e-56,98;UBERON:0002371,8.74e-56,76;UBERON:0002193,2.31e-52,108;UBERON:0001474,5.59e-51,82;UBERON:0002405,2.42e-46,93;UBERON:0004765,1.47e-45,90;UBERON:0001434,5.40e-40,100;UBERON:0003081,3.47e-21,203;UBERON:0002204,7.08e-20,167;UBERON:0000926,9.94e-10,315;UBERON:0004120,9.94e-10,315;UBERON:0006603,9.94e-10,315;UBERON:0002384,3.73e-09,371 | |||
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|short_description=p@chr1:111441743..111441763,+ | |short_description=p@chr1:111441743..111441763,+ | ||
}} | }} |
Latest revision as of 19:38, 27 July 2015
Short description: | p@chr1:111441743..111441763, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:111441743..111441763, + |
Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.29e-91 | 48 |
phagocyte | 3.29e-91 | 48 |
classical monocyte | 1.49e-84 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.49e-84 | 42 |
monopoietic cell | 1.25e-74 | 59 |
monocyte | 1.25e-74 | 59 |
monoblast | 1.25e-74 | 59 |
promonocyte | 1.25e-74 | 59 |
macrophage dendritic cell progenitor | 7.07e-72 | 61 |
myeloid leukocyte | 6.74e-70 | 72 |
myeloid lineage restricted progenitor cell | 1.04e-65 | 66 |
granulocyte monocyte progenitor cell | 1.38e-64 | 67 |
nongranular leukocyte | 2.05e-48 | 115 |
leukocyte | 1.43e-45 | 136 |
hematopoietic lineage restricted progenitor cell | 9.00e-44 | 120 |
myeloid cell | 4.35e-43 | 108 |
common myeloid progenitor | 4.35e-43 | 108 |
hematopoietic oligopotent progenitor cell | 6.20e-35 | 161 |
hematopoietic multipotent progenitor cell | 6.20e-35 | 161 |
hematopoietic stem cell | 1.33e-34 | 168 |
hematopoietic cell | 3.14e-32 | 177 |
neutrophil | 2.45e-10 | 3 |
mesenchymal cell | 3.78e-10 | 354 |
connective tissue cell | 9.98e-10 | 361 |
motile cell | 2.98e-08 | 386 |
macrophage | 3.07e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.33e-56 | 98 |
blood island | 5.33e-56 | 98 |
bone marrow | 8.74e-56 | 76 |
hemolymphoid system | 2.31e-52 | 108 |
bone element | 5.59e-51 | 82 |
immune system | 2.42e-46 | 93 |
skeletal element | 1.47e-45 | 90 |
skeletal system | 5.40e-40 | 100 |
lateral plate mesoderm | 3.47e-21 | 203 |
musculoskeletal system | 7.08e-20 | 167 |
mesoderm | 9.94e-10 | 315 |
mesoderm-derived structure | 9.94e-10 | 315 |
presumptive mesoderm | 9.94e-10 | 315 |
connective tissue | 3.73e-09 | 371 |