FFCP PHASE1:Hg19::chr1:145683530..145683562,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:145683530..145683562,+ | |||
|coexpression_cluster_id=C221 | |||
|description=CAGE_peak_at_chr1:145683530..145683562,+ | |description=CAGE_peak_at_chr1:145683530..145683562,+ | ||
|id=chr1:145683530..145683562,+ | |id=chr1:145683530..145683562,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.04e-23!180;CL:0000057!1.19e-22!75;CL:0002620!4.07e-21!23;CL:0002334!1.76e-10!12;CL:0000048!2.53e-07!430;CL:0000136!5.07e-07!15;CL:0000723!6.45e-07!436 | |ontology_enrichment_celltype=CL:0000055!4.04e-23!180;CL:0000057!1.19e-22!75;CL:0002620!4.07e-21!23;CL:0002334!1.76e-10!12;CL:0000048!2.53e-07!430;CL:0000136!5.07e-07!15;CL:0000723!6.45e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0002334;6.39e-21;12!CL:0002620;6.28e-15;23!CL:0002582;1.78e-13;3!CL:0002622;1.18e-12;3!CL:0000057;7.16e-10;73!CL:0002583;2.22e-09;2!CL:0002588;6.70e-09;2!CL:0002617;9.37e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.41e-24,76;CL:0002334,4.76e-21,12;CL:0002620,6.78e-15,23;CL:0002582,1.61e-13,3;CL:0002622,1.86e-12,3;CL:0002583,2.13e-09,2;CL:0000136,3.94e-09,15;CL:0000048,5.92e-09,427;CL:0002588,6.85e-09,2;CL:0000723,1.07e-08,433;CL:0002617,1.19e-08,2;CL:0000034,2.32e-08,441;CL:0000134,4.29e-08,354;CL:0000219,6.25e-08,386;CL:0002320,9.02e-08,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.06e-07!5;DOID:450!1.06e-07!5;DOID:66!1.06e-07!5;DOID:423!1.06e-07!5;DOID:0080000!1.06e-07!5;DOID:11722!1.06e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.88e-07;5!DOID:450;1.88e-07;5!DOID:66;1.88e-07;5!DOID:423;1.88e-07;5!DOID:0080000;1.88e-07;5!DOID:11722;1.88e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.99e-07,5;DOID:450,1.99e-07,5;DOID:66,1.99e-07,5;DOID:423,1.99e-07,5;DOID:0080000,1.99e-07,5;DOID:11722,1.99e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!4.65e-17!365;UBERON:0003102!1.31e-16!95;UBERON:0002199!2.97e-14!45;UBERON:0002416!2.97e-14!45;UBERON:0002097!3.95e-12!40;UBERON:0000914!7.66e-11!83;UBERON:0002329!7.66e-11!83;UBERON:0003077!7.66e-11!83;UBERON:0003059!7.66e-11!83;UBERON:0007282!7.66e-11!83;UBERON:0009618!7.66e-11!83;UBERON:0007285!7.66e-11!83;UBERON:0004290!9.91e-08!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0003102;1.25e-10;50!UBERON:0002097;6.88e-10;41!UBERON:0002199;9.49e-10;46!UBERON:0002416;9.49e-10;46!UBERON:0002072;5.28e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,6.66e-17,99;UBERON:0002199,1.14e-15,46;UBERON:0002416,1.14e-15,46;UBERON:0002097,4.95e-11,41;UBERON:0002072,4.87e-08,5;UBERON:0002384,2.48e-07,371 | |||
|phase1_expression=1.2717486548939,2.14100523890983,0.140954404095971,2.00146596706261,0.446961094427288,0.872338524100369,2.53299878168311,0,0,0.491467873003018,0,0,0,0.247532705920093,0,0.672325146451775,1.20538905604795,0,0.487932798790507,0.369363174230364,0,0,0,0.547497700291537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,1.71141546463335,0.149448680551801,0.469737994575059,0,0.98315564691574,0.816616685019573,1.35117749042945,0.103325781175765,0,0,0,0,2.35670559535693,2.12701483782339,1.38532057742091,0.438977620880838,0.919463387397059,0,0.113432183160021,2.69084453533293,0.427114777637135,0.423863802319124,1.50045548042201,1.13357782162283,0.515281080091258,1.30281799432113,2.70042131586026,13.738617727729,1.00973509697646,0.460249493211497,0.161646056818812,0.355009592516614,1.61203357164224,2.03472710772585,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0.928735856063958,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,4.15973914111831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55126058909333,0,0,0.26593811658487,1.04007436911366,0,0,0,0.428933980974443,0.542621605391443,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0,0.179060963239896,0,0,0,0,1.27047312111232,0,0,0,0,0,0,0,0,0,0,0,1.78428988797162,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.553107505625109,0.60818530127658,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0.992431231275107,1.68808170616869,2.24528075546459,0,6.14048698880044,0,0,3.54682295746108,3.37367278094941,5.58464660893902,11.4235974420397,3.7187321107187,0,0,0,1.03333003348146,2.1850940160806,4.06485686374215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.275673144969061,0.214840489736547,1.0151168573996,0,0.178064071293475,0,0,0,0,1.85938219718914,0.31481234683064,0,0,0,0.869932992075073,0,0,0,0,0.38126038784765,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0.424216295861138,0,0.551365343546124,0,0,0,0,0,0,0,1.43411352204052,3.242218353433,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,104.846238171566,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0,0,0,0.613612095012929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.269604531922708,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,1.63085047288337,2.09205692624666,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0.250381861413,0.573409195690071,0,0,0.138348634936231,0,0,0,0,0,0,1.94031243752936,0.467426619694449,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,1.70789252563885,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0.398095888698616,0,8.24149692438703,5.38799182025471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17408349321616,0,0,0,0.159633859057151,0.41023272848151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0.591660003652827,0.426067023795788,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,1.48798007266701,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.103432995861895,0,0,0,0,0,0,0,0,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 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|phase1_expression=1.2717486548939,2.14100523890983,0.140954404095971,2.00146596706261,0.446961094427288,0.872338524100369,2.53299878168311,0,0,0.491467873003018,0,0,0,0.247532705920093,0,0.672325146451775,1.20538905604795,0,0.487932798790507,0.369363174230364,0,0,0,0.547497700291537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0.312160076830321,1.71141546463335,0.149448680551801,0.469737994575059,0,0.98315564691574,0.816616685019573,1.35117749042945,0.103325781175765,0,0,0,0,2.35670559535693,2.12701483782339,1.38532057742091,0.438977620880838,0.919463387397059,0,0.113432183160021,2.69084453533293,0.427114777637135,0.423863802319124,1.50045548042201,1.13357782162283,0.515281080091258,1.30281799432113,2.70042131586026,13.738617727729,1.00973509697646,0.460249493211497,0.161646056818812,0.355009592516614,1.61203357164224,2.03472710772585,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0.928735856063958,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,4.15973914111831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55126058909333,0,0,0.26593811658487,1.04007436911366,0,0,0,0.428933980974443,0.542621605391443,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0,0.179060963239896,0,0,0,0,1.27047312111232,0,0,0,0,0,0,0,0,0,0,0,1.78428988797162,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.553107505625109,0.60818530127658,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0.992431231275107,1.68808170616869,2.24528075546459,0,6.14048698880044,0,0,3.54682295746108,3.37367278094941,5.58464660893902,11.4235974420397,3.7187321107187,0,0,0,1.03333003348146,2.1850940160806,4.06485686374215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.275673144969061,0.214840489736547,1.0151168573996,0,0.178064071293475,0,0,0,0,1.85938219718914,0.31481234683064,0,0,0,0.869932992075073,0,0,0,0,0.38126038784765,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0.424216295861138,0,0.551365343546124,0,0,0,0,0,0,0,1.43411352204052,3.242218353433,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,104.846238171566,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0,0,0,0.613612095012929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.269604531922708,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,1.63085047288337,2.09205692624666,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0.250381861413,0.573409195690071,0,0,0.138348634936231,0,0,0,0,0,0,1.94031243752936,0.467426619694449,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,1.70789252563885,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0.398095888698616,0,8.24149692438703,5.38799182025471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17408349321616,0,0,0,0.159633859057151,0.41023272848151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0.591660003652827,0.426067023795788,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,1.48798007266701,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.103432995861895,0,0,0,0,0,0,0,0,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr1:145683530..145683562,+ | |short_description=p@chr1:145683530..145683562,+ | ||
}} | }} |
Latest revision as of 20:51, 27 July 2015
Short description: | p@chr1:145683530..145683562, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:145683530..145683562, + |
Coexpression cluster: | C221_alveolar_Osteoblast_Myoblast_mesenchymal_liposarcoma_Smooth_hepatocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.41e-24 | 76 |
preadipocyte | 4.76e-21 | 12 |
skin fibroblast | 6.78e-15 | 23 |
visceral preadipocyte | 1.61e-13 | 3 |
prostate stromal cell | 1.86e-12 | 3 |
subcutaneous preadipocyte | 2.13e-09 | 2 |
fat cell | 3.94e-09 | 15 |
multi fate stem cell | 5.92e-09 | 427 |
smooth muscle cell of the umbilical vein | 6.85e-09 | 2 |
somatic stem cell | 1.07e-08 | 433 |
adipocyte of breast | 1.19e-08 | 2 |
stem cell | 2.32e-08 | 441 |
mesenchymal cell | 4.29e-08 | 354 |
motile cell | 6.25e-08 | 386 |
connective tissue cell | 9.02e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
surface structure | 6.66e-17 | 99 |
integument | 1.14e-15 | 46 |
integumental system | 1.14e-15 | 46 |
skin of body | 4.95e-11 | 41 |
hypodermis | 4.87e-08 | 5 |
connective tissue | 2.48e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.99e-07 | 5 |
myotonic disease | 1.99e-07 | 5 |
muscle tissue disease | 1.99e-07 | 5 |
myopathy | 1.99e-07 | 5 |
muscular disease | 1.99e-07 | 5 |
myotonic dystrophy | 1.99e-07 | 5 |