FFCP PHASE1:Hg19::chr1:155804425..155804436,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:155804425..155804436,- | |||
|coexpression_cluster_id=C157 | |||
|description=CAGE_peak_at_chr1:155804425..155804436,- | |||
|id=chr1:155804425..155804436,- | |||
|ontology_enrichment_celltype=CL:0002603!7.97e-09!3;CL:0002322!8.07e-09!5;CL:0000064!3.39e-08!3;CL:0005012!3.39e-08!3;CL:0000067!3.39e-08!3;CL:0002304!3.39e-08!3;CL:0000708!4.14e-08!3;CL:0002319!4.61e-08!25;CL:0000133!3.21e-07!59;CL:0000039!4.68e-07!7;CL:0000586!4.68e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;9.69e-36;7!CL:0000586;9.69e-36;7!CL:0000047;6.93e-09;2!CL:0002549;6.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.70e-36,7;CL:0000586,9.70e-36,7;CL:0002549,8.09e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.67e-25;10!UBERON:0005564;3.67e-25;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;1.05e-17;8!DOID:3095;1.05e-17;22!DOID:2994;1.05e-17;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,8.34e-18,8;DOID:3095,1.05e-17,22;DOID:2994,1.05e-17,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!4.26e-25!82;UBERON:0005743!1.55e-23!86;UBERON:0002346!1.48e-21!90;UBERON:0003075!2.19e-21!86;UBERON:0007284!2.19e-21!86;UBERON:0001049!3.50e-21!57;UBERON:0005068!3.50e-21!57;UBERON:0006241!3.50e-21!57;UBERON:0007135!3.50e-21!57;UBERON:0000073!1.67e-20!94;UBERON:0001016!1.67e-20!94;UBERON:0003076!2.54e-19!15;UBERON:0003057!2.54e-19!15;UBERON:0002616!1.96e-18!59;UBERON:0000955!7.98e-18!69;UBERON:0006238!7.98e-18!69;UBERON:0004733!2.06e-16!12;UBERON:0002028!2.06e-16!12;UBERON:0007277!2.06e-16!12;UBERON:0004732!5.27e-15!13;UBERON:0000924!6.28e-13!173;UBERON:0006601!6.28e-13!173;UBERON:0004121!1.41e-12!169;UBERON:0000033!1.68e-12!123;UBERON:0000153!1.72e-12!129;UBERON:0007811!1.72e-12!129;UBERON:0002298!1.34e-11!8;UBERON:0003056!5.19e-11!61;UBERON:0000488!2.65e-10!4;UBERON:0002680!5.87e-10!9;UBERON:0001895!5.87e-10!9;UBERON:0010092!5.87e-10!9;UBERON:0002308!6.48e-10!9;UBERON:0000125!6.48e-10!9;UBERON:0001896!6.62e-09!3;UBERON:0005290!6.62e-09!3;UBERON:0010096!6.62e-09!3;UBERON:0002780!1.42e-08!41;UBERON:0001890!1.42e-08!41;UBERON:0006240!1.42e-08!41;UBERON:0006331!1.61e-08!3;UBERON:0003080!2.66e-08!42;UBERON:0001778!3.39e-08!3;UBERON:0001775!3.39e-08!3;UBERON:0003210!4.14e-08!3;UBERON:0007625!1.79e-07!11;UBERON:0007023!2.46e-07!115;UBERON:0002037!3.63e-07!6;UBERON:0006215!3.63e-07!6;UBERON:0002203!7.21e-07!6;UBERON:0001768!7.21e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.46e-31;8!UBERON:0003135;6.49e-23;11!UBERON:0000991;3.59e-12;21!UBERON:0003101;1.24e-11;22!UBERON:0000079;1.24e-11;22!UBERON:0005629;6.93e-09;2!UBERON:0005358;6.93e-09;2!UBERON:0001886;6.93e-09;2!UBERON:0004086;6.93e-09;2!UBERON:0005282;6.93e-09;2!UBERON:0005281;6.93e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.46e-31,8;UBERON:0003135,6.49e-23,11;UBERON:0000991,3.59e-12,21;UBERON:0009196,3.59e-12,21;UBERON:0009117,3.59e-12,21;UBERON:0005564,3.59e-12,21;UBERON:0004176,1.24e-11,22;UBERON:0003101,1.24e-11,22;UBERON:0000079,1.24e-11,22;UBERON:0005629,8.09e-09,2;UBERON:0005358,8.09e-09,2;UBERON:0001886,8.09e-09,2;UBERON:0004086,8.09e-09,2;UBERON:0005282,8.09e-09,2;UBERON:0005281,8.09e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.612002073732759,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0,0.232387885739037,0.621966330092223,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,1.30788020649984,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.76228387266739,1.30139853857622,0.773288812777695,0.167516265334349,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,1.35357396370308,1.76456280885966,2.01385904371011,0.37950746544837,0,0,0,0,0,0,0,0,0,0,0,0.943615861729479,0,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.815425236441684,1.04602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0.573409195690071,1.66393577305278,0.248385611765534,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785233868459781,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0.252332849670158,15.2971800749174,0,12.4426372285218,9.08539177902906,16.3572921172024,20.8087257612671,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr1:155804425..155804436,- | |||
}} |
Latest revision as of 22:20, 27 July 2015
Short description: | p@chr1:155804425..155804436, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:155804425..155804436, - |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.70e-36 | 7 |
germ cell | 9.70e-36 | 7 |
fibroblast of choroid plexus | 8.09e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 2.46e-31 | 8 |
male reproductive organ | 6.49e-23 | 11 |
gonad | 3.59e-12 | 21 |
indifferent external genitalia | 3.59e-12 | 21 |
indifferent gonad | 3.59e-12 | 21 |
gonad primordium | 3.59e-12 | 21 |
external genitalia | 1.24e-11 | 22 |
male organism | 1.24e-11 | 22 |
male reproductive system | 1.24e-11 | 22 |
vascular plexus | 8.09e-09 | 2 |
ventricle of nervous system | 8.09e-09 | 2 |
choroid plexus | 8.09e-09 | 2 |
brain ventricle | 8.09e-09 | 2 |
ventricular system of brain | 8.09e-09 | 2 |
ventricular system of central nervous system | 8.09e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 8.34e-18 | 8 |
germ cell and embryonal cancer | 1.05e-17 | 22 |
germ cell cancer | 1.05e-17 | 22 |