FFCP PHASE1:Hg19::chr1:173991614..173991629,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_ENST00000424181_5end | |association_with_transcript=-17bp_to_ENST00000424181_5end | ||
|cluster_id=chr1:173991614..173991629,+ | |||
|coexpression_cluster_id=C3894 | |||
|description=CAGE_peak_3_at_ENST00000424181_5end | |description=CAGE_peak_3_at_ENST00000424181_5end | ||
|id=chr1:173991614..173991629,+ | |id=chr1:173991614..173991629,+ | ||
|ontology_enrichment_celltype=CL:0000037!8.15e-28!172;CL:0000566!8.15e-28!172;CL:0000988!2.92e-26!182;CL:0002032!3.60e-26!165;CL:0000837!3.60e-26!165;CL:0002057!3.72e-26!42;CL:0000738!7.06e-24!140;CL:0000763!9.43e-24!112;CL:0000049!9.43e-24!112;CL:0000860!2.40e-22!45;CL:0000766!2.26e-19!76;CL:0002031!1.14e-18!124;CL:0000557!8.13e-18!71;CL:0002087!1.84e-17!119;CL:0002009!2.65e-16!65;CL:0000839!2.87e-16!70;CL:0002194!3.34e-15!63;CL:0000576!3.34e-15!63;CL:0000040!3.34e-15!63;CL:0000559!3.34e-15!63 | |ontology_enrichment_celltype=CL:0000037!8.15e-28!172;CL:0000566!8.15e-28!172;CL:0000988!2.92e-26!182;CL:0002032!3.60e-26!165;CL:0000837!3.60e-26!165;CL:0002057!3.72e-26!42;CL:0000738!7.06e-24!140;CL:0000763!9.43e-24!112;CL:0000049!9.43e-24!112;CL:0000860!2.40e-22!45;CL:0000766!2.26e-19!76;CL:0002031!1.14e-18!124;CL:0000557!8.13e-18!71;CL:0002087!1.84e-17!119;CL:0002009!2.65e-16!65;CL:0000839!2.87e-16!70;CL:0002194!3.34e-15!63;CL:0000576!3.34e-15!63;CL:0000040!3.34e-15!63;CL:0000559!3.34e-15!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.22e-36;33!CL:0002057;2.22e-36;33!CL:0000576;9.33e-28;48!CL:0000473;2.79e-24;39!CL:0000234;2.79e-24;39!CL:0000766;2.28e-20;69!CL:0002087;5.20e-12;104!CL:0000763;6.13e-12;100!CL:0000738;1.48e-09;136!CL:0002393;1.48e-08;6!CL:0002397;1.48e-08;6!CL:0000094;3.90e-08;8!CL:0000988;2.81e-07;177!CL:0000081;7.05e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.58e-50,42;CL:0002057,4.58e-50,42;CL:0000473,9.26e-42,48;CL:0000234,9.26e-42,48;CL:0000766,1.74e-40,72;CL:0000738,3.43e-37,136;CL:0000557,1.40e-36,67;CL:0000763,4.00e-36,108;CL:0000049,4.00e-36,108;CL:0002032,8.81e-36,161;CL:0000837,8.81e-36,161;CL:0000037,1.46e-35,168;CL:0002009,1.97e-34,61;CL:0000988,2.62e-34,177;CL:0002194,3.86e-32,59;CL:0000576,3.86e-32,59;CL:0000040,3.86e-32,59;CL:0000559,3.86e-32,59;CL:0000839,4.51e-32,66;CL:0002031,3.19e-30,120;CL:0002087,4.45e-28,115;CL:0002393,3.17e-11,9;CL:0002397,3.17e-11,9;CL:0000134,7.08e-10,354;CL:0002320,1.23e-09,361;CL:0000219,3.30e-09,386;CL:0000094,2.66e-08,8;CL:0000034,3.91e-07,441;CL:0000048,5.81e-07,427;CL:0000081,6.42e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.49e-35;42!CL:0000049;4.08e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.87e-18!102;UBERON:0003061!9.87e-18!102;UBERON:0002371!1.99e-16!80;UBERON:0002193!4.75e-16!112;UBERON:0001474!4.42e-15!86;UBERON:0002405!6.45e-12!115;UBERON:0004765!2.09e-10!101;UBERON:0001434!2.09e-10!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.03e-33,98;UBERON:0003061,1.03e-33,98;UBERON:0002371,2.68e-33,76;UBERON:0001474,1.46e-29,82;UBERON:0002193,1.07e-28,108;UBERON:0004765,2.20e-25,90;UBERON:0002405,2.43e-25,93;UBERON:0001434,3.80e-21,100;UBERON:0003081,8.03e-11,203;UBERON:0002384,1.62e-09,371;UBERON:0002204,4.05e-08,167 | |||
|phase1_expression=0,0,0.140954404095971,0,0,2.61701557230111,0,0,0,0,0.697801167972428,0.218441372130172,0,0.247532705920093,0.331397375727916,0.672325146451775,0.602694528023977,0,0,0.738726348460727,1.22400414746552,1.25381888591235,0,0.273748850145768,0.125542639594803,0.152826811495903,0,0.0787107813136792,4.72037132218685,1.91914699048606,6.81190942590734,0,0,0.369754010166788,0.309868802321207,0.426507697462265,5.5784083473621,4.43196326825502,3.60980005446255,5.859293509328,0.447830948479849,0,0.515151135268373,1.74477886535478,3.02300754951048,4.12392904019288,3.25400651667958,5.34518254428373,5.26500830521676,4.02769349251011,2.81776777182011,6.14853797710322,9.99762474136194,6.45484683583826,10.8341189275473,1.88242339542605,1.36453075028923,2.24723484445085,8.26426509401437,4.49300637906531,6.39337125799041,1.9791078011203,4.78712778291916,5.96714650745772,3.48251086354301,6.80862269629368,3.11411124497787,5.7787193009051,5.73631210262222,7.60160956467908,2.42159801053347,3.31449872388808,3.79754864929061,2.95757400836718,2.12604299965044,5.87044207423452,2.3589012540764,2.4028302854641,2.25015821375912,1.71007646244749,1.19350006319454,5.66258876670365,1.75996244461323,0,0,0.853460445133014,0,1.72425731986345,0.661044872784862,0,2.27685187643779,1.17447437874188,1.14681968437569,10.5737062863221,2.24203425192614,2.37045676297569,1.57367816091066,2.35806457649499,3.08402248499264,1.67186495390678,2.93330039970231,3.31413464014313,5.84480185223734,1.00269411196656,0.589211814949674,1.99380505125259,1.62482318259009,0.512365278902701,0.520237390239513,0.822189523018381,0.829050053357545,0.289803085735052,4.30031033169975,4.54819407752512,4.18142095219907,1.13309342697566,3.44898444241729,1.71813722741315,2.53019692019503,0.95569624297229,0,0,1.80690142893327,1.4078527226986,1.24930726552346,0.710331756132051,0.821127996921047,1.00803371612366,0.802320587350522,1.44824403882799,0,0,0,0.361439152384566,0,0.144846518960824,0.795285947051099,0,0.283604451492204,0.221729397462564,0.702678285545008,1.5062593682237,0,0,0,0.174129737299267,0.132957960518865,0.953962497221368,0.571994910780128,0.371457501329565,0,0,1.04142150482278,0,0,0.275118041940067,0.835979866147242,0.516833518338658,0.35576626268671,0.33472061276467,0.402829317109147,0,0.24406205754817,0.735326160691737,1.62028389576352,0.267899184852239,0.44905874525234,0.563057402416611,0,0,0.183201743930407,6.58902087180316,7.75560528296651,0,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0,0.653847612453835,0.302714855289863,0,0.468642863667593,0.312160076830321,1.1409436430889,0,0,0.485618833104395,0.140450806702248,0.204154171254893,0.368502951935304,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0,0.125118519871964,0.277064115484183,0,0,0.600952235626387,0,0.358779271377724,0,0,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0.194874010322397,0,0.184099797284599,0.646584227275248,0,0.302256294682921,0,0,0,0.286804595389004,0.487894824518382,0.265059536642971,0.813357600086629,0.414644220061482,0.252320850875628,1.09493207722749,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0.196221465125346,0.38474715694639,1.4763109092493,0,0,1.47008711385542,1.26755034821831,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0,0,0,0,0,1.03993478527958,0,0.231860809950154,0.117408694235822,0.144366447761074,0,0.380508304469197,0.790204397959275,2.57545848628462,0.246217006087397,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,2.07328115540772,3.60299883542404,2.90357596880674,0.126995788584338,0.763976851116555,3.51652341630141,0,0,0,0,0.560655421726804,0.87192013766656,0.1466765716419,0.129271715757778,0,0,0,0,0.514414748524284,0,1.3321108950805,0.142977993658148,0,2.46972101034231,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,1.14861935834114,1.42636905040718,0.144781306667579,0.205476322550383,0.179060963239896,0.224170287987055,0.197030760201927,1.2937654491571,1.66845947163673,0.254094624222463,2.60279707715243,0,0.335032530668698,1.27587750330633,2.24702107184155,0,2.48649308061621,0.24538298343828,0.500170521059677,0.271265023699736,0.207970861530807,0.356857977594324,0,0.117141414992713,0.601892199455438,0,0,0,0.368738337083406,0,0.783204629850962,1.71571711905428,0.620304078368662,1.94142780736755,0.426910231213777,0.303127571446259,0,0.30239029332968,0,1.07423381301644,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0.114814448164607,0.364182336013434,0.131124414959424,1.35359883872224,0.0770153371044148,1.56869953835371,0,0,1.13733384070897,0.340187410553031,0.215915916102139,4.62681758070868,0.541892875087706,0,0,0,0,0.438519753291869,0.261435451024901,0.512900250232778,0.328014645699706,0,0.412164046590889,0.54941678891006,0.082509499920588,0,0,0,0.290012154876366,0.308097234229289,0,0.137836572484531,0.107420244868274,0.435050081742686,0.255679882248303,0,0,0,0.638063562472921,0.10115778085555,0,0,0,0.308033580176089,0,0,0.37064843820784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| ||
|short_description=p3@ENST00000424181 | |short_description=p3@ENST00000424181 | ||
}} | }} |
Latest revision as of 00:35, 28 July 2015
Short description: | p3@ENST00000424181 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000424181_5end |
Coexpression cluster: | C3894_CD14_immature_Eosinophils_Basophils_CD34_Mast_Whole |
Association with transcript: | -17bp_to_ENST00000424181_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.03e-33 | 98 |
blood island | 1.03e-33 | 98 |
bone marrow | 2.68e-33 | 76 |
bone element | 1.46e-29 | 82 |
hemolymphoid system | 1.07e-28 | 108 |
skeletal element | 2.20e-25 | 90 |
immune system | 2.43e-25 | 93 |
skeletal system | 3.80e-21 | 100 |
lateral plate mesoderm | 8.03e-11 | 203 |
connective tissue | 1.62e-09 | 371 |
musculoskeletal system | 4.05e-08 | 167 |