FFCP PHASE1:Hg19::chr1:173991614..173991629,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-17bp_to_ENST00000424181_5end | |||
|cluster_id=chr1:173991614..173991629,+ | |||
|coexpression_cluster_id=C3894 | |||
|description=CAGE_peak_3_at_ENST00000424181_5end | |||
|id=chr1:173991614..173991629,+ | |||
|ontology_enrichment_celltype=CL:0000037!8.15e-28!172;CL:0000566!8.15e-28!172;CL:0000988!2.92e-26!182;CL:0002032!3.60e-26!165;CL:0000837!3.60e-26!165;CL:0002057!3.72e-26!42;CL:0000738!7.06e-24!140;CL:0000763!9.43e-24!112;CL:0000049!9.43e-24!112;CL:0000860!2.40e-22!45;CL:0000766!2.26e-19!76;CL:0002031!1.14e-18!124;CL:0000557!8.13e-18!71;CL:0002087!1.84e-17!119;CL:0002009!2.65e-16!65;CL:0000839!2.87e-16!70;CL:0002194!3.34e-15!63;CL:0000576!3.34e-15!63;CL:0000040!3.34e-15!63;CL:0000559!3.34e-15!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.22e-36;33!CL:0002057;2.22e-36;33!CL:0000576;9.33e-28;48!CL:0000473;2.79e-24;39!CL:0000234;2.79e-24;39!CL:0000766;2.28e-20;69!CL:0002087;5.20e-12;104!CL:0000763;6.13e-12;100!CL:0000738;1.48e-09;136!CL:0002393;1.48e-08;6!CL:0002397;1.48e-08;6!CL:0000094;3.90e-08;8!CL:0000988;2.81e-07;177!CL:0000081;7.05e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.58e-50,42;CL:0002057,4.58e-50,42;CL:0000473,9.26e-42,48;CL:0000234,9.26e-42,48;CL:0000766,1.74e-40,72;CL:0000738,3.43e-37,136;CL:0000557,1.40e-36,67;CL:0000763,4.00e-36,108;CL:0000049,4.00e-36,108;CL:0002032,8.81e-36,161;CL:0000837,8.81e-36,161;CL:0000037,1.46e-35,168;CL:0002009,1.97e-34,61;CL:0000988,2.62e-34,177;CL:0002194,3.86e-32,59;CL:0000576,3.86e-32,59;CL:0000040,3.86e-32,59;CL:0000559,3.86e-32,59;CL:0000839,4.51e-32,66;CL:0002031,3.19e-30,120;CL:0002087,4.45e-28,115;CL:0002393,3.17e-11,9;CL:0002397,3.17e-11,9;CL:0000134,7.08e-10,354;CL:0002320,1.23e-09,361;CL:0000219,3.30e-09,386;CL:0000094,2.66e-08,8;CL:0000034,3.91e-07,441;CL:0000048,5.81e-07,427;CL:0000081,6.42e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.49e-35;42!CL:0000049;4.08e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.87e-18!102;UBERON:0003061!9.87e-18!102;UBERON:0002371!1.99e-16!80;UBERON:0002193!4.75e-16!112;UBERON:0001474!4.42e-15!86;UBERON:0002405!6.45e-12!115;UBERON:0004765!2.09e-10!101;UBERON:0001434!2.09e-10!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.03e-33,98;UBERON:0003061,1.03e-33,98;UBERON:0002371,2.68e-33,76;UBERON:0001474,1.46e-29,82;UBERON:0002193,1.07e-28,108;UBERON:0004765,2.20e-25,90;UBERON:0002405,2.43e-25,93;UBERON:0001434,3.80e-21,100;UBERON:0003081,8.03e-11,203;UBERON:0002384,1.62e-09,371;UBERON:0002204,4.05e-08,167 | |||
|phase1_expression=0,0,0.140954404095971,0,0,2.61701557230111,0,0,0,0,0.697801167972428,0.218441372130172,0,0.247532705920093,0.331397375727916,0.672325146451775,0.602694528023977,0,0,0.738726348460727,1.22400414746552,1.25381888591235,0,0.273748850145768,0.125542639594803,0.152826811495903,0,0.0787107813136792,4.72037132218685,1.91914699048606,6.81190942590734,0,0,0.369754010166788,0.309868802321207,0.426507697462265,5.5784083473621,4.43196326825502,3.60980005446255,5.859293509328,0.447830948479849,0,0.515151135268373,1.74477886535478,3.02300754951048,4.12392904019288,3.25400651667958,5.34518254428373,5.26500830521676,4.02769349251011,2.81776777182011,6.14853797710322,9.99762474136194,6.45484683583826,10.8341189275473,1.88242339542605,1.36453075028923,2.24723484445085,8.26426509401437,4.49300637906531,6.39337125799041,1.9791078011203,4.78712778291916,5.96714650745772,3.48251086354301,6.80862269629368,3.11411124497787,5.7787193009051,5.73631210262222,7.60160956467908,2.42159801053347,3.31449872388808,3.79754864929061,2.95757400836718,2.12604299965044,5.87044207423452,2.3589012540764,2.4028302854641,2.25015821375912,1.71007646244749,1.19350006319454,5.66258876670365,1.75996244461323,0,0,0.853460445133014,0,1.72425731986345,0.661044872784862,0,2.27685187643779,1.17447437874188,1.14681968437569,10.5737062863221,2.24203425192614,2.37045676297569,1.57367816091066,2.35806457649499,3.08402248499264,1.67186495390678,2.93330039970231,3.31413464014313,5.84480185223734,1.00269411196656,0.589211814949674,1.99380505125259,1.62482318259009,0.512365278902701,0.520237390239513,0.822189523018381,0.829050053357545,0.289803085735052,4.30031033169975,4.54819407752512,4.18142095219907,1.13309342697566,3.44898444241729,1.71813722741315,2.53019692019503,0.95569624297229,0,0,1.80690142893327,1.4078527226986,1.24930726552346,0.710331756132051,0.821127996921047,1.00803371612366,0.802320587350522,1.44824403882799,0,0,0,0.361439152384566,0,0.144846518960824,0.795285947051099,0,0.283604451492204,0.221729397462564,0.702678285545008,1.5062593682237,0,0,0,0.174129737299267,0.132957960518865,0.953962497221368,0.571994910780128,0.371457501329565,0,0,1.04142150482278,0,0,0.275118041940067,0.835979866147242,0.516833518338658,0.35576626268671,0.33472061276467,0.402829317109147,0,0.24406205754817,0.735326160691737,1.62028389576352,0.267899184852239,0.44905874525234,0.563057402416611,0,0,0.183201743930407,6.58902087180316,7.75560528296651,0,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0,0.653847612453835,0.302714855289863,0,0.468642863667593,0.312160076830321,1.1409436430889,0,0,0.485618833104395,0.140450806702248,0.204154171254893,0.368502951935304,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0,0.125118519871964,0.277064115484183,0,0,0.600952235626387,0,0.358779271377724,0,0,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0.194874010322397,0,0.184099797284599,0.646584227275248,0,0.302256294682921,0,0,0,0.286804595389004,0.487894824518382,0.265059536642971,0.813357600086629,0.414644220061482,0.252320850875628,1.09493207722749,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0.196221465125346,0.38474715694639,1.4763109092493,0,0,1.47008711385542,1.26755034821831,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0,0,0,0,0,1.03993478527958,0,0.231860809950154,0.117408694235822,0.144366447761074,0,0.380508304469197,0.790204397959275,2.57545848628462,0.246217006087397,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,2.07328115540772,3.60299883542404,2.90357596880674,0.126995788584338,0.763976851116555,3.51652341630141,0,0,0,0,0.560655421726804,0.87192013766656,0.1466765716419,0.129271715757778,0,0,0,0,0.514414748524284,0,1.3321108950805,0.142977993658148,0,2.46972101034231,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,1.14861935834114,1.42636905040718,0.144781306667579,0.205476322550383,0.179060963239896,0.224170287987055,0.197030760201927,1.2937654491571,1.66845947163673,0.254094624222463,2.60279707715243,0,0.335032530668698,1.27587750330633,2.24702107184155,0,2.48649308061621,0.24538298343828,0.500170521059677,0.271265023699736,0.207970861530807,0.356857977594324,0,0.117141414992713,0.601892199455438,0,0,0,0.368738337083406,0,0.783204629850962,1.71571711905428,0.620304078368662,1.94142780736755,0.426910231213777,0.303127571446259,0,0.30239029332968,0,1.07423381301644,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0.114814448164607,0.364182336013434,0.131124414959424,1.35359883872224,0.0770153371044148,1.56869953835371,0,0,1.13733384070897,0.340187410553031,0.215915916102139,4.62681758070868,0.541892875087706,0,0,0,0,0.438519753291869,0.261435451024901,0.512900250232778,0.328014645699706,0,0.412164046590889,0.54941678891006,0.082509499920588,0,0,0,0.290012154876366,0.308097234229289,0,0.137836572484531,0.107420244868274,0.435050081742686,0.255679882248303,0,0,0,0.638063562472921,0.10115778085555,0,0,0,0.308033580176089,0,0,0.37064843820784,0.143124886741991,0.372158369359667,0.316379424718726,0.190630193923825,0.511795582622668,0,0,0.78494864019923,0,0.274537029736055,0.353437207037059,0.404364963146632,0,0.421258456238981,1.46290121726877,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0.551365343546124,0,0.876901770507525,0,0,0.608731130888112,0.6196469961995,1.40847801266121,0,0,0.35667105148125,0.354761064070598,0.211107635297664,0,0,1.04980416073495,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,2.02979043692868,0.764637207142375,2.84823593587081,1.42939065274673,0.822724546172388,3.8908398671563,5.94034580961926,2.37937552888281,0.534120355637366,0,0.735120647943095,1.30062222588003,1.15415370381156,0.569134746787313,0.159426272728822,0.59873811429845,1.1490322207942,0,1.94773164164733,0.842391534340376,1.59764275323235,0.313359791546046,0,0.169291777801603,0.642352300414798,0.201799707191048,0,0.687010689511529,0.921722292925374,0.894704431569664,4.50492682622153,1.56310476321632,0.278406173895242,0,0.270455678475983,0.99921590399346,1.4098700508785,0.935702702041099,0.146508179271894,0.485442086998054,0.222886768554957,0.568272293612826,0.47748896947538,0.296964680832639,0.307160702099232,1.9882952955326,0.422008249231538,0,0.329607748453519,0.211125408127993,0.996239941255349,0,0,0.102268682502155,0.369254416383208,0,0.0898683511473268,0,2.55786185113436,0.0986434056369336,2.3948309234694,0,0.969332746095218,0.185536196323703,0,0.520855522170466,0.174919999992391,1.44999915086959,0,2.2882828526349,0.945550727071745,2.06846023944879,1.45802306691627,0.347249989866585,0.885741385813839,0.844175070377856,0,0.552896299656123,0,0.219385397153973,0,0,0.153900517007594,0,0.23056390438806,0.0897576444097721,0.434589487688032,0.31900115973192,0,0.533034776018635,0,1.41282230755522,2.49317522850235,0.902382642468723,0.784250137270958,0.503464760927528,0.569261198172555,0.794682894901893,0.421996129056054,0,0.848118428603645,0.432777279484182,0.995261931078505,0.0884575645033392,0,0,0,0,0.134802265961354,0.802577647298789,0.468528891450678,1.45963831372533,0.19566461893209,0.242780379534093,0,0,0.61214552326098,0.947798694427319,0.300646838828985,0.103688191397247,0,0.330991955875499,0.627865836814451,1.19472429772959,0,0,0.347119476670262,0.293977192243133,0,0,0.171986032471617,0,0,0,0,0.176512253383001,0,0.137041924646751,0.19871461170299,0.189932387867636,0.195551382734803,0.240476460754601,0,0,0.432271251462318,0.80175617316141,0.343189995723929,0.14405479798815,0,0.235694034616795,0,0.104602846312333,0,0.577901179803038,0,0.136905378891993,1.27746588066972,0,0,0,0.229160424011684,0,0,0,0,0.201550417460179,0,2.32991899054908,0.0787831823072236,0.329663433524666,0.0674035438541849,0.295282444544246,0.0846733320657845,0,0.136203406111576,3.53656926623042,3.71356478812531,2.49264202817511,3.14963448172101,6.96421759102155,0.242998226632099,0.670869375198532,0.0788057072991982,0.209818352539992,0,0.179287339332845,0,0,0.662091970365432,0.25426853765475,0,0,0,0,0.492555124496034,0.170388021785422,1.13312091520126,0.439656701034247,0,0.258565912723101,0.13223260174269,0.342173675768659,0,0.320362237703084,0.314408610199332,0.414239055347196,0,1.18566979138767,0.121792598380896,0,0.544017803369474,1.2534494701135,0,0.327872630709804,1.57054096250234,0,0.244052529803926,0.3755727921195,0,0.554645257684261,0.0620964029413835,1.10678907948985,0.37494122388632,0,0,0,0.468334905806882,0.28984205722165,0.149254802886874,0.467426619694449,0,0,0.754703705257725,0,0.228840068396924,0.302461847526478,0.310874401165561,0.147855149989634,0.159296767163702,0,0,0,0,0,0.751288044986092,1.14241563650639,0,0,0.537052785212442,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0.179088841081487,0,0.438568099157414,0.176689145945881,0.38582807654183,0.337884881306145,0,0.345430341731199,0,0.414775308455192,1.55888247071511,1.0629187225069,0.817826971279221,0,0.245772908753719,0.211312123358627,0.59996218756479,2.56060151265938,0.516644938982447,0,0.184105950251841,0,1.24415452006595,0.511577485214607,0.646948868380091,0.629063767423586,0.436838552768056,2.0367903594483,0.212574920101683,0.743614585554013,2.23457967189298,0.318004350653419,1.89268188003008,2.40171224485641,0,0.3062454773532,0.0642292250964595,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0.994581110581374,0,0.40341013740704,0.781514011233092,0,0,0.443568258651136,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,0,0,0.527613733078862,0.638812138197976,0.535701835878287,1.68141861109412,0,0,0.0887023701626388,0.230467975111559,0.685952037749674,0.339848664884159,0,0,0.222462803784138,0.078493092850514,0,0.840816489941367,0,0.215927591218621,0.47775168788705,0.428859265059938,1.73814972905999,0,0.347716544605159,0,0,0,2.07377898544228,0.430227358820278,0,0,0.423387050190929,0.4582137370881,0.31020638566432,0,0.111855431797792,0.098150233615243,0,0,0,0,0.971421986118279,0.233939463462106,1.98950775161368,0.713520544665411,0,2.41869136839944,0.150962843566674,0.231522474323834,0.218559560503957,0.940634592723046,0,0,0.588925401344836,0.297046400327086,0,0,0.0939839179798536,0.128915775947154,0,0.357107877211315,0,0.160482733378337,1.46067277649303,0,0.430018749454354,0,0.135982980381829,0.436350690340377,0,0,0,0,1.26166424835079,0.98339014767326,4.56114603641173,0.305966489225945,0.26721740526556,0.18378979906969,1.0028301571695,3.78893491091197,7.502995644373,0.829169439458779,0.103432995861895,1.0661699095049,0,0,0.993195428733726,0.112131862580613,0,0.202117188958219,0,0,0.134704106029175,0.143444410785353,0.332660356546013,0,0.106727345877715,0,0.179650404213174,0,0.366724332548599,0,1.33151354837103,0.402547587182052,0 | |||
|short_description=p3@ENST00000424181 | |||
}} |
Latest revision as of 00:35, 28 July 2015
Short description: | p3@ENST00000424181 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000424181_5end |
Coexpression cluster: | C3894_CD14_immature_Eosinophils_Basophils_CD34_Mast_Whole |
Association with transcript: | -17bp_to_ENST00000424181_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.03e-33 | 98 |
blood island | 1.03e-33 | 98 |
bone marrow | 2.68e-33 | 76 |
bone element | 1.46e-29 | 82 |
hemolymphoid system | 1.07e-28 | 108 |
skeletal element | 2.20e-25 | 90 |
immune system | 2.43e-25 | 93 |
skeletal system | 3.80e-21 | 100 |
lateral plate mesoderm | 8.03e-11 | 203 |
connective tissue | 1.62e-09 | 371 |
musculoskeletal system | 4.05e-08 | 167 |