FFCP PHASE1:Hg19::chr1:174872019..174872028,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:174872019..174872028,+ | |||
|coexpression_cluster_id=C133 | |||
|description=CAGE_peak_at_chr1:174872019..174872028,+ | |description=CAGE_peak_at_chr1:174872019..174872028,+ | ||
|id=chr1:174872019..174872028,+ | |id=chr1:174872019..174872028,+ | ||
|ontology_enrichment_celltype=CL:0002166!7.35e-13!3;CL:0000066!2.36e-12!254;CL:0000223!1.46e-09!59;CL:0002076!3.87e-07!43 | |ontology_enrichment_celltype=CL:0002166!7.35e-13!3;CL:0000066!2.36e-12!254;CL:0000223!1.46e-09!59;CL:0002076!3.87e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002166;1.14e-27;3!CL:0002159;1.47e-13;14!CL:1000415;3.52e-11;2!CL:0002231;7.02e-08;3!CL:0002621;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.06e-27,3;CL:0002159,1.47e-13,14;CL:1000415,4.09e-11,2;CL:0002231,5.93e-08,3;CL:0002621,7.26e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006298;5.71e-21;1 | |||
|ontology_enrichment_disease=DOID:305!6.05e-11!106;DOID:1749!2.73e-09!14;DOID:3493!3.57e-09!2;DOID:0050687!1.26e-08!143;DOID:299!6.15e-07!25 | |ontology_enrichment_disease=DOID:305!6.05e-11!106;DOID:1749!2.73e-09!14;DOID:3493!3.57e-09!2;DOID:0050687!1.26e-08!143;DOID:299!6.15e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.82e-11;2!DOID:4929;3.52e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.82e-11,2;DOID:4929,4.52e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0002294!4.22e-14!7;UBERON:0001173!4.22e-14!7;UBERON:0004912!4.22e-14!7;UBERON:0009497!7.17e-11!25;UBERON:0000015!7.17e-11!25;UBERON:0002423!7.17e-11!25;UBERON:0006235!7.17e-11!25;UBERON:0004161!7.17e-11!25;UBERON:0001708!9.48e-10!4;UBERON:0001704!9.48e-10!4;UBERON:0002394!1.47e-09!4;UBERON:0003928!1.47e-09!4;UBERON:0004119!4.84e-09!169;UBERON:0000925!4.84e-09!169;UBERON:0006595!4.84e-09!169;UBERON:0005911!2.68e-08!82;UBERON:0008835!1.42e-07!22;UBERON:0003894!1.42e-07!22;UBERON:0009854!3.33e-07!23;UBERON:0001007!9.64e-07!155;UBERON:0001555!9.64e-07!155;UBERON:0007026!9.64e-07!155 | |ontology_enrichment_uberon=UBERON:0002294!4.22e-14!7;UBERON:0001173!4.22e-14!7;UBERON:0004912!4.22e-14!7;UBERON:0009497!7.17e-11!25;UBERON:0000015!7.17e-11!25;UBERON:0002423!7.17e-11!25;UBERON:0006235!7.17e-11!25;UBERON:0004161!7.17e-11!25;UBERON:0001708!9.48e-10!4;UBERON:0001704!9.48e-10!4;UBERON:0002394!1.47e-09!4;UBERON:0003928!1.47e-09!4;UBERON:0004119!4.84e-09!169;UBERON:0000925!4.84e-09!169;UBERON:0006595!4.84e-09!169;UBERON:0005911!2.68e-08!82;UBERON:0008835!1.42e-07!22;UBERON:0003894!1.42e-07!22;UBERON:0009854!3.33e-07!23;UBERON:0001007!9.64e-07!155;UBERON:0001555!9.64e-07!155;UBERON:0007026!9.64e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;4.92e-21;4!UBERON:0008895;4.92e-21;4!UBERON:0001736;5.71e-21;1!UBERON:0004913;5.71e-21;1!UBERON:0003703;5.71e-21;1!UBERON:0001174;5.71e-21;1!UBERON:0004914;5.71e-21;1!UBERON:0011159;4.83e-17;5!UBERON:0002294;3.15e-12;7!UBERON:0001173;3.15e-12;7!UBERON:0001829;3.52e-11;2!UBERON:0011137;2.87e-08;11!UBERON:0010323;2.87e-08;11!UBERON:0002110;7.02e-08;3!UBERON:0001949;7.02e-08;3!UBERON:0002114;7.02e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,4.68e-21,4;UBERON:0008895,4.68e-21,4;UBERON:0001736,5.16e-21,1;UBERON:0006298,5.16e-21,1;UBERON:0004913,9.43e-21,1;UBERON:0003703,9.43e-21,1;UBERON:0001174,9.43e-21,1;UBERON:0004914,9.43e-21,1;UBERON:0011159,4.64e-17,5;UBERON:0010188,2.18e-14,6;UBERON:0002539,2.18e-14,6;UBERON:0008816,2.18e-14,6;UBERON:0001829,3.35e-11,2;UBERON:0002294,1.20e-09,9;UBERON:0001173,1.20e-09,9;UBERON:0004912,1.20e-09,9;UBERON:0010323,2.82e-08,11;UBERON:0001949,7.26e-08,3;UBERON:0002110,7.76e-08,3;UBERON:0006242,7.76e-08,3;UBERON:0002114,8.29e-08,2;UBERON:0003102,3.81e-07,99 | |||
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| ||
|short_description=p@chr1:174872019..174872028,+ | |short_description=p@chr1:174872019..174872028,+ | ||
}} | }} |
Latest revision as of 00:38, 28 July 2015
Short description: | p@chr1:174872019..174872028, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:174872019..174872028, + |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.06e-27 | 3 |
general ecto-epithelial cell | 1.47e-13 | 14 |
epithelial cell of gall bladder | 4.09e-11 | 2 |
epithelial cell of prostate | 5.93e-08 | 3 |
gingival epithelial cell | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 4.68e-21 | 4 |
splanchnocranium | 4.68e-21 | 4 |
submandibular gland | 5.16e-21 | 1 |
submandibular gland primordium | 5.16e-21 | 1 |
hepatopancreatic ampulla | 9.43e-21 | 1 |
extrahepatic bile duct | 9.43e-21 | 1 |
common bile duct | 9.43e-21 | 1 |
duodenal papilla | 9.43e-21 | 1 |
primary subdivision of cranial skeletal system | 4.64e-17 | 5 |
protuberance | 2.18e-14 | 6 |
pharyngeal arch | 2.18e-14 | 6 |
embryonic head | 2.18e-14 | 6 |
major salivary gland | 3.35e-11 | 2 |
biliary system | 1.20e-09 | 9 |
biliary tree | 1.20e-09 | 9 |
biliary bud | 1.20e-09 | 9 |
cranial skeletal system | 2.82e-08 | 11 |
gingival epithelium | 7.26e-08 | 3 |
gallbladder | 7.76e-08 | 3 |
gall bladder primordium | 7.76e-08 | 3 |
duodenum | 8.29e-08 | 2 |
surface structure | 3.81e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.82e-11 | 2 |
tubular adenocarcinoma | 4.52e-11 | 2 |