FFCP PHASE1:Hg19::chr1:186270762..186270780,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:186270762..186270780,+ | |||
|coexpression_cluster_id=C287 | |||
|description=CAGE_peak_at_chr1:186270762..186270780,+ | |||
|id=chr1:186270762..186270780,+ | |||
|ontology_enrichment_celltype=CL:0000153!6.01e-10!9;CL:0000447!6.01e-10!9;CL:0000136!4.63e-09!15;CL:0000667!3.71e-08!6;CL:0000058!3.71e-08!6;CL:0000138!3.71e-08!6;CL:0002570!1.27e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000153;8.25e-23;9!CL:0000447;8.25e-23;9!CL:0000138;5.33e-18;6!CL:0000327;2.88e-13;15!CL:0000499;3.80e-13;28!CL:0000135;1.35e-12;3!CL:0000388;1.35e-12;3!CL:0002570;1.98e-12;8!CL:0002549;8.78e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,8.96e-23,9;CL:0000447,8.96e-23,9;CL:0000058,5.82e-18,6;CL:0000138,5.82e-18,6;CL:0000327,3.02e-13,15;CL:0000499,3.88e-13,28;CL:0000135,1.30e-12,3;CL:0000388,1.30e-12,3;CL:0002570,2.16e-12,8;CL:0002549,6.24e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006965;4.69e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.91e-12!115;UBERON:0001013!9.18e-09!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.54e-13;14!UBERON:0007846;1.35e-12;3!UBERON:0000043;1.35e-12;3!UBERON:0007845;1.35e-12;3!UBERON:0005629;8.78e-09;2!UBERON:0005358;8.78e-09;2!UBERON:0001886;8.78e-09;2!UBERON:0004086;8.78e-09;2!UBERON:0005282;8.78e-09;2!UBERON:0005281;8.78e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,1.67e-13,14;UBERON:0007846,1.30e-12,3;UBERON:0000043,1.30e-12,3;UBERON:0007845,1.30e-12,3;UBERON:0005629,6.24e-09,2;UBERON:0005358,6.24e-09,2;UBERON:0001886,6.24e-09,2;UBERON:0004086,6.24e-09,2;UBERON:0005282,6.24e-09,2;UBERON:0005281,6.24e-09,2 | |||
|phase1_expression=0.726713517082227,2.78330681058278,0,0,0.893922188854576,0,0,75.1746649377929,0.261185628199839,0,0,0,0,0.123766352960047,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0.541607727530031,0.896639238079726,1.1705341280389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,5.06014813338393,3.00802746381534,25.492987337105,142.356184522147,110.466115558698,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,1.81628913173918,2.88087962239999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0.38474715694639,0.738155454624648,0,0,0,36.7589600983309,35.3817798003945,18.3144871071235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.690605505112,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,1.44781306667579,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.36807447515742,2.50085260529839,0,0,0,0,0,0,0,1.03473071292505,0,0,0,3.13281851940385,0.686286847621712,0,0,0,0,0,0.604780586659361,0.248107807818777,0,0,0,0.511707249066704,0.160853921143607,0,0,0.887808626565635,0.821271560138091,0,0.929683027679674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.07941968721561,0,0,0,0,0,0.096670718292122,0,0.460511024178389,0,0.107420244868274,0.145016693914229,0.255679882248303,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,10.3442741295855,22.3920527212733,0,0,0,0,0,7.53150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.05794985995417,0,0,0,0,0,0,0.994147647766298,0,0,0,0,8.36841550654493,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,0,0,0,0.337005664903385,0.802577647298789,0,0,0,0,0,0,0,3.09614240179591,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0.19351266257817,0.0730893170861856,0.246346371159628,0.290967049465258,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,7.72606886645828,0,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57347663186684,0,0,0,0,0,0,0,0,0,27.5518199314795,1.32506888912221,0,0,0,0,1.06787412567695,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0.612691153526923,0.327872630709804,0,0,0,0,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,15.0747350915743,0.701139929541673,6.10286447652875,0.189403005275089,2.0125432140206,14.2369795455446,0.686520205190771,0.453692771289717,13.8339108518675,0,0,0,0,3.31764966272684,0.265841714557995,0,0,0,0,0,0,0,0,0,2.74716564146234,1.01024846629776,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0.992422356778588,0.351742488719241,0,0,0,1.82089681270989,0,0,0,0,0,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,1.71543706023975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58971534875158,3.2852098193999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9585900930838,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0.135982980381829,0,0,1.11598505450025,16.1761470020996,1.73050624849516,0,0,0,0,0,0,0,0.682008283964155,0.535928260312357,0,0,1.27940389140589,0,0.129177819672012,0.496597714366863,0,0.12729431655633,0,0.870866991587845,0,0.134704106029175,0.932388670104793,0.332660356546013,0,0,0,0,0,0,0,0,1.20764276154616,0 | |||
|short_description=p@chr1:186270762..186270780,+ | |||
}} |
Latest revision as of 01:29, 28 July 2015
Short description: | p@chr1:186270762..186270780, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:186270762..186270780, + |
Coexpression cluster: | C287_Hepatocyte_Chondrocyte_Adipocyte_Synoviocyte_liver_tenocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 8.96e-23 | 9 |
carbohydrate secreting cell | 8.96e-23 | 9 |
chondroblast | 5.82e-18 | 6 |
chondrocyte | 5.82e-18 | 6 |
extracellular matrix secreting cell | 3.02e-13 | 15 |
stromal cell | 3.88e-13 | 28 |
fibrocyte | 1.30e-12 | 3 |
tendon cell | 1.30e-12 | 3 |
mesenchymal stem cell of adipose | 2.16e-12 | 8 |
fibroblast of choroid plexus | 6.24e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 1.67e-13 | 14 |
dense regular connective tissue | 1.30e-12 | 3 |
tendon | 1.30e-12 | 3 |
regular connective tissue | 1.30e-12 | 3 |
vascular plexus | 6.24e-09 | 2 |
ventricle of nervous system | 6.24e-09 | 2 |
choroid plexus | 6.24e-09 | 2 |
brain ventricle | 6.24e-09 | 2 |
ventricular system of brain | 6.24e-09 | 2 |
ventricular system of central nervous system | 6.24e-09 | 2 |