FFCP PHASE1:Hg19::chr1:186277407..186277429,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:186277407..186277429,+ | |||
|coexpression_cluster_id=C287 | |||
|description=CAGE_peak_at_chr1:186277407..186277429,+ | |||
|id=chr1:186277407..186277429,+ | |||
|ontology_enrichment_celltype=CL:0000153!8.99e-10!9;CL:0000447!8.99e-10!9;CL:0000667!5.13e-08!6;CL:0000058!5.13e-08!6;CL:0000138!5.13e-08!6;CL:0002570!2.22e-07!8;CL:0000327!4.67e-07!14;CL:0000569!7.00e-07!4;CL:0000011!7.00e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.94e-24;9!CL:0000447;1.94e-24;9!CL:0000138;3.12e-19;6!CL:0000327;2.90e-14;15!CL:0000499;9.47e-12;28!CL:0002549;1.43e-09;2!CL:0002570;4.53e-09;8!CL:0000214;3.84e-07;3!CL:0000135;5.25e-07;3!CL:0000388;5.25e-07;3!CL:0002521;7.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.23e-24,9;CL:0000447,2.23e-24,9;CL:0000058,3.62e-19,6;CL:0000138,3.62e-19,6;CL:0000327,3.14e-14,15;CL:0000499,9.80e-12,28;CL:0000136,1.08e-09,15;CL:0002549,1.28e-09,2;CL:0002570,4.78e-09,8;CL:0000214,3.84e-07,3;CL:0000135,5.02e-07,3;CL:0000388,5.02e-07,3;CL:0002521,7.17e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;8.22e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.99e-10!115;UBERON:0001013!9.62e-09!14;UBERON:0007100!2.13e-08!27;UBERON:0000948!5.11e-07!24;UBERON:0005498!5.11e-07!24;UBERON:0004140!5.11e-07!24;UBERON:0009881!5.11e-07!24;UBERON:0004141!5.11e-07!24;UBERON:0003084!5.11e-07!24;UBERON:0007005!5.11e-07!24;UBERON:0004139!5.11e-07!24;UBERON:0004291!5.11e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.06e-14;14!UBERON:0005090;1.12e-09;2!UBERON:0001630;1.12e-09;2!UBERON:0005629;1.43e-09;2!UBERON:0005358;1.43e-09;2!UBERON:0001886;1.43e-09;2!UBERON:0004086;1.43e-09;2!UBERON:0005282;1.43e-09;2!UBERON:0005281;1.43e-09;2!UBERON:0002072;2.32e-08;5!UBERON:0006915;3.84e-07;3!UBERON:0007616;3.84e-07;3!UBERON:0002217;3.84e-07;3!UBERON:0002018;3.84e-07;3!UBERON:0007846;5.25e-07;3!UBERON:0000043;5.25e-07;3!UBERON:0007845;5.25e-07;3!UBERON:0002190;7.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,1.08e-14,14;UBERON:0005090,1.07e-09,2;UBERON:0001630,1.07e-09,2;UBERON:0005629,1.28e-09,2;UBERON:0005358,1.28e-09,2;UBERON:0001886,1.28e-09,2;UBERON:0004086,1.28e-09,2;UBERON:0005282,1.28e-09,2;UBERON:0005281,1.28e-09,2;UBERON:0002072,2.12e-08,5;UBERON:0006915,3.84e-07,3;UBERON:0007616,3.84e-07,3;UBERON:0002217,3.84e-07,3;UBERON:0002018,3.84e-07,3;UBERON:0007846,5.02e-07,3;UBERON:0000043,5.02e-07,3;UBERON:0007845,5.02e-07,3;UBERON:0002190,7.17e-07,3 | |||
|phase1_expression=0.363356758541113,2.5692062866918,0.281908808191942,1.0007329835313,0,0,0,41.061791772744,1.56711376919903,0,0,0,0,0.123766352960047,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0,0,0.443067789167242,0.541607727530031,2.0494611156108,2.34106825607781,0,0.276350017785848,0,0,0.267540828089713,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,14.0961269429981,1.00267582127178,39.8327927142265,57.2605881876791,81.7546582108428,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,1.66493170409425,4.03323147135999,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.8291614912042,45.2100519671708,36.6289742142471,0.441463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,0,1.30303176000821,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.391602314925481,0,0,0,0,0,0,0.604780586659361,0,0,0,0.128139149255701,0,0,0,0.154209693802656,1.59805552781814,3.28508624055237,0,2.5566283261191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.94596855909067,0,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0,0,0.725083469571143,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,13.7219962943482,16.1354497550352,0,0,0,0,0,5.55448424582997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.56731081233197,0,0,0,0,0,0,0,0,0,0,0,3.98495976502139,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0.067401132980677,3.21031058919516,0,0,0,0,0,0,0,2.14834370736859,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.219267951258557,0.164230914106418,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0.599037001496973,0.858452096273142,0,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.2881719582402,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,13.4828054983836,0,0,0,0,0,0.533937062838473,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,17.4628119377643,0.467426619694449,15.5345641220732,0.189403005275089,0.50313580350515,11.567545880755,0.686520205190771,0.756154618816195,14.7665340553641,0.147855149989634,0,0,0,7.87941794897625,0,0,0.150257608997218,0,0,0,0,0,0,0,2.06037423109676,1.34699795506368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,0.992422356778588,0.175871244359621,0,0.535701835878287,0,1.21393120847326,0,0,0,0,0.135939465953663,0,0,0,0.078493092850514,0,0,0,0,0,0.857718530119876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58971534875158,2.77189578511867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.113278637917,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,16.1761470020996,3.46101249699031,0,0,0,0,0,0,0,0.454672189309436,0,0,0,0.852935927603924,0,0,0.124149428591716,0,0.190941474834495,0,0,0,0.0673520530145875,0.717222053926764,0.332660356546013,0,0,0,0,0,0,0,0,3.42165449104745,0 | |||
|short_description=p@chr1:186277407..186277429,+ | |||
}} |
Latest revision as of 01:30, 28 July 2015
Short description: | p@chr1:186277407..186277429, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:186277407..186277429, + |
Coexpression cluster: | C287_Hepatocyte_Chondrocyte_Adipocyte_Synoviocyte_liver_tenocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.23e-24 | 9 |
carbohydrate secreting cell | 2.23e-24 | 9 |
chondroblast | 3.62e-19 | 6 |
chondrocyte | 3.62e-19 | 6 |
extracellular matrix secreting cell | 3.14e-14 | 15 |
stromal cell | 9.80e-12 | 28 |
fat cell | 1.08e-09 | 15 |
fibroblast of choroid plexus | 1.28e-09 | 2 |
mesenchymal stem cell of adipose | 4.78e-09 | 8 |
synovial cell | 3.84e-07 | 3 |
fibrocyte | 5.02e-07 | 3 |
tendon cell | 5.02e-07 | 3 |
subcutaneous fat cell | 7.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 1.08e-14 | 14 |
muscle structure | 1.07e-09 | 2 |
muscle organ | 1.07e-09 | 2 |
vascular plexus | 1.28e-09 | 2 |
ventricle of nervous system | 1.28e-09 | 2 |
choroid plexus | 1.28e-09 | 2 |
brain ventricle | 1.28e-09 | 2 |
ventricular system of brain | 1.28e-09 | 2 |
ventricular system of central nervous system | 1.28e-09 | 2 |
hypodermis | 2.12e-08 | 5 |
stratified squamous epithelium | 3.84e-07 | 3 |
layer of synovial tissue | 3.84e-07 | 3 |
synovial joint | 3.84e-07 | 3 |
synovial membrane of synovial joint | 3.84e-07 | 3 |
dense regular connective tissue | 5.02e-07 | 3 |
tendon | 5.02e-07 | 3 |
regular connective tissue | 5.02e-07 | 3 |
subcutaneous adipose tissue | 7.17e-07 | 3 |