FFCP PHASE1:Hg19::chr1:187987302..187987307,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:187987302..187987307,+ | |||
|description=CAGE_peak_at_chr1:187987302..187987307,+ | |description=CAGE_peak_at_chr1:187987302..187987307,+ | ||
|id=chr1:187987302..187987307,+ | |id=chr1:187987302..187987307,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.78e-11!254;CL:0002202!8.99e-10!9;CL:0002632!8.99e-10!9;CL:0002321!3.85e-09!248;CL:0002368!9.34e-09!13;CL:0000220!9.72e-09!246;CL:0000068!1.45e-08!3;CL:0000069!1.45e-08!3;CL:0000307!1.45e-08!3;CL:0000377!1.45e-08!3;CL:0002328!2.83e-08!3;CL:0000076!6.39e-08!62;CL:0002322!2.02e-07!5;CL:0000362!6.42e-07!8 | |ontology_enrichment_celltype=CL:0000066!3.78e-11!254;CL:0002202!8.99e-10!9;CL:0002632!8.99e-10!9;CL:0002321!3.85e-09!248;CL:0002368!9.34e-09!13;CL:0000220!9.72e-09!246;CL:0000068!1.45e-08!3;CL:0000069!1.45e-08!3;CL:0000307!1.45e-08!3;CL:0000377!1.45e-08!3;CL:0002328!2.83e-08!3;CL:0000076!6.39e-08!62;CL:0002322!2.02e-07!5;CL:0000362!6.42e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.36e-29;13!CL:0002202;8.98e-28;9!CL:0002632;8.98e-28;9!CL:0000307;9.46e-22;3!CL:0002328;1.86e-21;3!CL:0000317;6.42e-09;2!CL:1000448;6.42e-09;2!CL:0002308;6.42e-09;2!CL:0002140;6.42e-09;2!CL:0000362;1.09e-07;9!CL:0002076;8.32e-07;42 | |ontology_enrichment_celltype_v019=CL:0002368;1.36e-29;13!CL:0002202;8.98e-28;9!CL:0002632;8.98e-28;9!CL:0000307;9.46e-22;3!CL:0002328;1.86e-21;3!CL:0000317;6.42e-09;2!CL:1000448;6.42e-09;2!CL:0002308;6.42e-09;2!CL:0002140;6.42e-09;2!CL:0000362;1.09e-07;9!CL:0002076;8.32e-07;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.10e-29,13;CL:0002202,8.69e-28,9;CL:0002632,8.69e-28,9;CL:0000068,9.47e-22,3;CL:0000069,9.47e-22,3;CL:0000307,9.47e-22,3;CL:0000377,9.47e-22,3;CL:0002328,1.76e-21,3;CL:0002076,3.14e-09,42;CL:0000317,4.70e-09,2;CL:1000448,4.70e-09,2;CL:0002308,4.70e-09,2;CL:0002140,4.70e-09,2;CL:0000362,1.05e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;9.46e-22;3 | |ontology_enrichment_development_v019=CL:0000377;9.46e-22;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3193;6.42e-09;2!DOID:962;6.42e-09;2 | |ontology_enrichment_disease_v019=DOID:3193;6.42e-09;2!DOID:962;6.42e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3193,8.74e-09,2;DOID:962,8.74e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0004815!2.83e-08!3;UBERON:0002031!2.83e-08!3 | |ontology_enrichment_uberon=UBERON:0004815!2.83e-08!3;UBERON:0002031!2.83e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.86e-21;3!UBERON:0002031;1.86e-21;3!UBERON:0007196;7.90e-17;15!UBERON:0001558;7.90e-17;15!UBERON:0002185;2.76e-13;5!UBERON:0003126;6.99e-10;7!UBERON:0001005;6.99e-10;7!UBERON:0000485;9.31e-10;7!UBERON:0002419;6.42e-09;2!UBERON:0003714;6.42e-09;2!UBERON:0007771;6.42e-09;2!UBERON:0003297;6.42e-09;2!UBERON:0001821;6.42e-09;2!UBERON:0003487;6.42e-09;2!UBERON:0001820;6.42e-09;2!UBERON:0005178;5.48e-08;34!UBERON:0002224;5.48e-08;34!UBERON:0000065;5.96e-08;44!UBERON:0000072;2.53e-07;37!UBERON:0005181;7.03e-07;35 | |ontology_enrichment_uberon_v019=UBERON:0004815;1.86e-21;3!UBERON:0002031;1.86e-21;3!UBERON:0007196;7.90e-17;15!UBERON:0001558;7.90e-17;15!UBERON:0002185;2.76e-13;5!UBERON:0003126;6.99e-10;7!UBERON:0001005;6.99e-10;7!UBERON:0000485;9.31e-10;7!UBERON:0002419;6.42e-09;2!UBERON:0003714;6.42e-09;2!UBERON:0007771;6.42e-09;2!UBERON:0003297;6.42e-09;2!UBERON:0001821;6.42e-09;2!UBERON:0003487;6.42e-09;2!UBERON:0001820;6.42e-09;2!UBERON:0005178;5.48e-08;34!UBERON:0002224;5.48e-08;34!UBERON:0000065;5.96e-08;44!UBERON:0000072;2.53e-07;37!UBERON:0005181;7.03e-07;35 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.76e-21,3;UBERON:0002031,1.76e-21,3;UBERON:0007196,7.74e-17,15;UBERON:0001558,7.74e-17,15;UBERON:0002185,2.68e-13,5;UBERON:0003126,7.00e-10,7;UBERON:0001005,7.00e-10,7;UBERON:0002419,4.70e-09,2;UBERON:0007771,4.70e-09,2;UBERON:0003297,4.70e-09,2;UBERON:0001821,4.70e-09,2;UBERON:0003487,4.70e-09,2;UBERON:0001820,4.70e-09,2;UBERON:0005089,4.70e-09,2;UBERON:0005088,4.70e-09,2;UBERON:0003714,8.74e-09,2;UBERON:0000485,8.60e-08,9;UBERON:0005178,1.39e-07,34;UBERON:0002224,1.39e-07,34;UBERON:0005181,2.26e-07,35;UBERON:0000065,3.62e-07,54;UBERON:0008947,8.33e-07,38;UBERON:0003258,8.33e-07,38 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45185470921107,1.14940825229924,0.472264687882075,0,0,0,3.67768489791571,1.204823675113,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.225222960966644,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0.348581828608555,1.14027160516907,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,1.1240175325762,0.100528972411631,0.185176890317059,0,0,0,0,0.352226082707465,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,1.53135254993501,0,0,0,0.6970372701606,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.865999014529609,2.01090682660736,4.3556393944529,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.490080431962063,0,0.144269212976445,0,0,3.99158742865633,0,0,0,0.561594356226918,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,1.13852239634511,0.158936578980379,0,0,0.141353071433941,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0.343609788497747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677386656526276,0,0,0.643012593860077,0.412618309791701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.624902039810533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0.19998739585493,0,0,0,0,0,0,0.255788742607303,0.107824811396682,0,0,0,0,0,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0.691403925334676,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0.23248285073625,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.218531143927391,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:187987302..187987307,+ | |short_description=p@chr1:187987302..187987307,+ | ||
}} | }} |
Latest revision as of 01:34, 28 July 2015
Short description: | p@chr1:187987302..187987307, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:187987302..187987307, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.10e-29 | 13 |
epithelial cell of tracheobronchial tree | 8.69e-28 | 9 |
epithelial cell of lower respiratory tract | 8.69e-28 | 9 |
duct epithelial cell | 9.47e-22 | 3 |
branched duct epithelial cell | 9.47e-22 | 3 |
tracheal epithelial cell | 9.47e-22 | 3 |
tracheoblast | 9.47e-22 | 3 |
bronchial epithelial cell | 1.76e-21 | 3 |
endo-epithelial cell | 3.14e-09 | 42 |
sebum secreting cell | 4.70e-09 | 2 |
epithelial cell of sweat gland | 4.70e-09 | 2 |
epithelial cell of skin gland | 4.70e-09 | 2 |
acinar cell of sebaceous gland | 4.70e-09 | 2 |
epidermal cell | 1.05e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.76e-21 | 3 |
epithelium of bronchus | 1.76e-21 | 3 |
tracheobronchial tree | 7.74e-17 | 15 |
lower respiratory tract | 7.74e-17 | 15 |
bronchus | 2.68e-13 | 5 |
trachea | 7.00e-10 | 7 |
respiratory airway | 7.00e-10 | 7 |
skin gland | 4.70e-09 | 2 |
epidermis gland | 4.70e-09 | 2 |
gland of integumental system | 4.70e-09 | 2 |
sebaceous gland | 4.70e-09 | 2 |
skin sebaceous gland | 4.70e-09 | 2 |
sweat gland | 4.70e-09 | 2 |
sweat gland placode | 4.70e-09 | 2 |
sebaceous gland placode | 4.70e-09 | 2 |
neural tissue | 8.74e-09 | 2 |
simple columnar epithelium | 8.60e-08 | 9 |
thoracic cavity element | 1.39e-07 | 34 |
thoracic cavity | 1.39e-07 | 34 |
thoracic segment organ | 2.26e-07 | 35 |
respiratory tract | 3.62e-07 | 54 |
respiratory primordium | 8.33e-07 | 38 |
endoderm of foregut | 8.33e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 8.74e-09 | 2 |
neurofibroma | 8.74e-09 | 2 |