FFCP PHASE1:Hg19::chr1:198324725..198324738,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:198324725..198324738,+ | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_at_chr1:198324725..198324738,+ | |description=CAGE_peak_at_chr1:198324725..198324738,+ | ||
|id=chr1:198324725..198324738,+ | |id=chr1:198324725..198324738,+ | ||
|ontology_enrichment_celltype=CL:0002253!9.25e-08!2;CL:0000054!1.87e-07!2;CL:0000137!1.87e-07!2;CL:0000092!1.87e-07!2 | |ontology_enrichment_celltype=CL:0002253!9.25e-08!2;CL:0000054!1.87e-07!2;CL:0000137!1.87e-07!2;CL:0000092!1.87e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002253;4.32e-26;2!CL:0002563;8.82e-14;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,4.32e-26,2;CL:0002563,8.82e-14,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!3.98e-14!1;DOID:1357!3.98e-14!1;DOID:0060085!1.25e-13!1;DOID:3165!1.25e-13!1;DOID:0060121!1.25e-13!1;DOID:2438!1.25e-13!1;DOID:4418!1.25e-13!1;DOID:3119!1.09e-08!14;DOID:200!1.87e-07!2;DOID:4305!1.87e-07!2 | |ontology_enrichment_disease=DOID:0050619!3.98e-14!1;DOID:1357!3.98e-14!1;DOID:0060085!1.25e-13!1;DOID:3165!1.25e-13!1;DOID:0060121!1.25e-13!1;DOID:2438!1.25e-13!1;DOID:4418!1.25e-13!1;DOID:3119!1.09e-08!14;DOID:200!1.87e-07!2;DOID:4305!1.87e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:0050619;3.99e-50;1!DOID:1357;3.99e-50;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.99e-50,1;DOID:1357,3.99e-50,1 | |||
|ontology_enrichment_uberon=UBERON:0001764!3.98e-14!1;UBERON:0001825!3.98e-14!1;UBERON:0001052!1.26e-13!4;UBERON:0004907!4.33e-11!5;UBERON:0000473!2.95e-07!8 | |ontology_enrichment_uberon=UBERON:0001764!3.98e-14!1;UBERON:0001825!3.98e-14!1;UBERON:0001052!1.26e-13!4;UBERON:0004907!4.33e-11!5;UBERON:0000473!2.95e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;3.99e-50;1!UBERON:0001825;3.99e-50;1!UBERON:0001052;8.82e-14;4!UBERON:0001242;8.82e-14;4!UBERON:0001262;8.82e-14;4!UBERON:0004786;8.82e-14;4!UBERON:0004808;8.82e-14;4!UBERON:0001277;8.82e-14;4!UBERON:0004907;2.66e-11;5!UBERON:0000485;1.89e-08;7!UBERON:0003929;1.89e-08;7!UBERON:0003350;1.49e-07;8!UBERON:0000473;1.80e-07;8!UBERON:0001155;7.48e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,3.99e-50,1;UBERON:0001825,3.99e-50,1;UBERON:0001052,8.82e-14,4;UBERON:0001242,8.82e-14,4;UBERON:0001262,8.82e-14,4;UBERON:0004786,8.82e-14,4;UBERON:0004808,8.82e-14,4;UBERON:0001277,8.82e-14,4;UBERON:0004907,2.66e-11,5;UBERON:0003350,1.49e-07,8;UBERON:0000473,1.80e-07,8;UBERON:0001155,7.48e-07,9;UBERON:0000485,7.48e-07,9 | |||
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|short_description=p@chr1:198324725..198324738,+ | |short_description=p@chr1:198324725..198324738,+ | ||
}} | }} |
Latest revision as of 01:54, 28 July 2015
Short description: | p@chr1:198324725..198324738, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:198324725..198324738, + |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 4.32e-26 | 2 |
intestinal epithelial cell | 8.82e-14 | 4 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 3.99e-50 | 1 |
paranasal sinus | 3.99e-50 | 1 |
rectum | 8.82e-14 | 4 |
intestinal mucosa | 8.82e-14 | 4 |
wall of intestine | 8.82e-14 | 4 |
gastrointestinal system mucosa | 8.82e-14 | 4 |
gastrointestinal system epithelium | 8.82e-14 | 4 |
intestinal epithelium | 8.82e-14 | 4 |
lower digestive tract | 2.66e-11 | 5 |
epithelium of mucosa | 1.49e-07 | 8 |
testis | 1.80e-07 | 8 |
colon | 7.48e-07 | 9 |
simple columnar epithelium | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.99e-50 | 1 |
maxillary sinus cancer | 3.99e-50 | 1 |