FFCP PHASE1:Hg19::chr1:198414156..198414159,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:198414156..198414159,+ | |||
|description=CAGE_peak_at_chr1:198414156..198414159,+ | |description=CAGE_peak_at_chr1:198414156..198414159,+ | ||
|id=chr1:198414156..198414159,+ | |id=chr1:198414156..198414159,+ | ||
|ontology_enrichment_celltype=CL:0002620!1.16e-07!23 | |ontology_enrichment_celltype=CL:0002620!1.16e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002592;1.83e-14;3!CL:1000306;2.53e-11;4!CL:0002547;2.53e-11;4!CL:0002537;2.74e-09;5 | |ontology_enrichment_celltype_v019=CL:0002592;1.83e-14;3!CL:1000306;2.53e-11;4!CL:0002547;2.53e-11;4!CL:0002537;2.74e-09;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002592,1.60e-14,3;CL:1000306,2.53e-11,4;CL:0002547,2.53e-11,4;CL:0002537,2.74e-09,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001981!2.52e-07!60;UBERON:0007500!2.52e-07!60;UBERON:0004537!2.52e-07!60;UBERON:0006965!2.52e-07!60;UBERON:0002199!5.10e-07!45;UBERON:0002416!5.10e-07!45;UBERON:0004573!7.34e-07!33;UBERON:0004571!7.34e-07!33 | |ontology_enrichment_uberon=UBERON:0001981!2.52e-07!60;UBERON:0007500!2.52e-07!60;UBERON:0004537!2.52e-07!60;UBERON:0006965!2.52e-07!60;UBERON:0002199!5.10e-07!45;UBERON:0002416!5.10e-07!45;UBERON:0004573!7.34e-07!33;UBERON:0004571!7.34e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0003498;1.83e-14;3!UBERON:0005985;1.83e-14;3!UBERON:0001621;1.83e-14;3!UBERON:0004797;2.53e-11;4!UBERON:0000415;2.53e-11;4!UBERON:0007240;2.53e-11;4!UBERON:0005742;2.53e-11;4!UBERON:0005734;2.53e-11;4!UBERON:0004664;2.53e-11;4!UBERON:0004663;2.53e-11;4!UBERON:0004573;4.97e-11;33!UBERON:0004571;4.97e-11;33!UBERON:0000947;1.37e-08;21!UBERON:0010191;1.37e-08;21!UBERON:0001637;4.43e-08;42!UBERON:0003509;4.43e-08;42!UBERON:0004572;4.43e-08;42!UBERON:0000305;5.38e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0003498;1.83e-14;3!UBERON:0005985;1.83e-14;3!UBERON:0001621;1.83e-14;3!UBERON:0004797;2.53e-11;4!UBERON:0000415;2.53e-11;4!UBERON:0007240;2.53e-11;4!UBERON:0005742;2.53e-11;4!UBERON:0005734;2.53e-11;4!UBERON:0004664;2.53e-11;4!UBERON:0004663;2.53e-11;4!UBERON:0004573;4.97e-11;33!UBERON:0004571;4.97e-11;33!UBERON:0000947;1.37e-08;21!UBERON:0010191;1.37e-08;21!UBERON:0001637;4.43e-08;42!UBERON:0003509;4.43e-08;42!UBERON:0004572;4.43e-08;42!UBERON:0000305;5.38e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,1.60e-14,3;UBERON:0004573,1.24e-11,33;UBERON:0004571,1.24e-11,33;UBERON:0000415,2.53e-11,4;UBERON:0007240,2.53e-11,4;UBERON:0005742,2.53e-11,4;UBERON:0005734,2.53e-11,4;UBERON:0004664,2.53e-11,4;UBERON:0004663,2.53e-11,4;UBERON:0001637,2.59e-09,42;UBERON:0003509,2.59e-09,42;UBERON:0004572,2.59e-09,42;UBERON:0003498,2.97e-09,5;UBERON:0005985,2.97e-09,5;UBERON:0000947,1.37e-08,21;UBERON:0010191,1.37e-08,21;UBERON:0004797,5.08e-07,7;UBERON:0000305,5.38e-07,7;UBERON:0007500,7.68e-07,59;UBERON:0001981,7.68e-07,59;UBERON:0004537,7.68e-07,59;UBERON:0006965,7.68e-07,59 | |||
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| ||
|short_description=p@chr1:198414156..198414159,+ | |short_description=p@chr1:198414156..198414159,+ | ||
}} | }} |
Latest revision as of 01:54, 28 July 2015
Short description: | p@chr1:198414156..198414159, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:198414156..198414159, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 1.60e-14 | 3 |
fibroblast of tunica adventitia of artery | 2.53e-11 | 4 |
fibroblast of the aortic adventitia | 2.53e-11 | 4 |
amnion mesenchymal stem cell | 2.74e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 1.60e-14 | 3 |
systemic artery | 1.24e-11 | 33 |
systemic arterial system | 1.24e-11 | 33 |
artery wall | 2.53e-11 | 4 |
tunica adventitia of artery | 2.53e-11 | 4 |
adventitia | 2.53e-11 | 4 |
tunica adventitia of blood vessel | 2.53e-11 | 4 |
aorta tunica adventitia | 2.53e-11 | 4 |
aorta wall | 2.53e-11 | 4 |
artery | 2.59e-09 | 42 |
arterial blood vessel | 2.59e-09 | 42 |
arterial system | 2.59e-09 | 42 |
heart blood vessel | 2.97e-09 | 5 |
coronary vessel | 2.97e-09 | 5 |
aorta | 1.37e-08 | 21 |
aortic system | 1.37e-08 | 21 |
blood vessel layer | 5.08e-07 | 7 |
amnion | 5.38e-07 | 7 |
epithelial tube open at both ends | 7.68e-07 | 59 |
blood vessel | 7.68e-07 | 59 |
blood vasculature | 7.68e-07 | 59 |
vascular cord | 7.68e-07 | 59 |