FFCP PHASE1:Hg19::chr1:26202447..26202459,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:26202447..26202459,- | |||
|description=CAGE_peak_at_chr1:26202447..26202459,- | |description=CAGE_peak_at_chr1:26202447..26202459,- | ||
|id=chr1:26202447..26202459,- | |id=chr1:26202447..26202459,- | ||
|ontology_enrichment_celltype=CL:0000066!2.12e-09!254 | |ontology_enrichment_celltype=CL:0000066!2.12e-09!254 | ||
|ontology_enrichment_celltype_v019=CL:0000349;9.88e-21;19!CL:0002577;3.01e-14;3!CL:0002536;3.81e-09;2!CL:0002537;1.66e-08;5 | |ontology_enrichment_celltype_v019=CL:0000349;9.88e-21;19!CL:0002577;3.01e-14;3!CL:0002536;3.81e-09;2!CL:0002537;1.66e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.35e-20,19;CL:0002577,2.74e-14,3;CL:0002536,4.92e-09,2;CL:0002537,2.43e-08,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.09e-10!14;UBERON:0000158!5.09e-10!14;UBERON:0000064!1.52e-09!219;UBERON:0005156!7.91e-08!59;UBERON:0000990!7.91e-08!59;UBERON:0000062!6.10e-07!511;UBERON:0004923!6.69e-07!57;UBERON:0004119!7.55e-07!169;UBERON:0000925!7.55e-07!169;UBERON:0006595!7.55e-07!169;UBERON:0006554!8.07e-07!44 | |ontology_enrichment_uberon=UBERON:0005631!5.09e-10!14;UBERON:0000158!5.09e-10!14;UBERON:0000064!1.52e-09!219;UBERON:0005156!7.91e-08!59;UBERON:0000990!7.91e-08!59;UBERON:0000062!6.10e-07!511;UBERON:0004923!6.69e-07!57;UBERON:0004119!7.55e-07!169;UBERON:0000925!7.55e-07!169;UBERON:0006595!7.55e-07!169;UBERON:0006554!8.07e-07!44 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.52e-19;24!UBERON:0001987;6.07e-18;4!UBERON:0000305;3.85e-15;7!UBERON:0005631;9.38e-15;10!UBERON:0000158;9.38e-15;10 | |ontology_enrichment_uberon_v019=UBERON:0000478;2.52e-19;24!UBERON:0001987;6.07e-18;4!UBERON:0000305;3.85e-15;7!UBERON:0005631;9.38e-15;10!UBERON:0000158;9.38e-15;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.38e-29,14;UBERON:0000158,5.38e-29,14;UBERON:0000478,2.53e-19,24;UBERON:0001987,2.98e-18,4;UBERON:0004340,2.98e-18,4;UBERON:0003124,8.54e-16,7;UBERON:0000305,7.25e-15,7;UBERON:0004871,5.66e-13,8;UBERON:0004923,2.08e-09,66;UBERON:0006554,2.95e-07,47;UBERON:0001008,4.57e-07,48;UBERON:0003100,4.73e-07,41 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0.631719873426831,0,0.245733936501509,2.09340350391728,1.09220686065086,1.31883489114227,0,0,0,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,0.154816123316076,0,0.6024118375565,0.739508020333575,0,0,0,0,0,0.217010870715852,0.447830948479849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.209658645508376,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,2.43806866313962,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0.283604451492204,0.443458794925128,0.351339142772504,0.982343066232845,0.728590576585084,1.48313777113772,0,0,0,0,0,0,0,0.860234595106124,0,0,0.419499436209906,0,0,0,0,0,0,0,0.488124115096339,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0.872188104285069,0,0.12663051166458,0.529636723252875,0.286836620748814,0,0,0,0,0,0.269421344139376,0,0,0.576175924479999,0,0.312160076830321,1.1409436430889,0.747243402759005,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0,1.18800285728205,0.247266929278557,0.910161361938026,0,0,0,0,0.877955241761676,0,0.45071417671979,0.113432183160021,0.538168907066586,0.427114777637135,0,0.300091096084402,0.103052529238439,0,0.18611685633159,1.18143432568886,0,1.00973509697646,0.0920498986422993,0.161646056818812,0.355009592516614,0.302256294682921,0.339121184620975,1.15956511897978,0.272746120590835,1.43402297694502,0.121973706129595,0.397589304964456,0.116193942869518,0.310983165046111,0,1.09493207722749,0,0,0,0.464367928031979,0,0,0.168584690078102,0.241011029883482,0.441175890929576,0.217879444092406,0,0.404493924480493,0.784885860501384,0.38474715694639,0,0,0,0,0,0,0,0,0.368965315629341,0.343135620597051,0.98775256867763,0,0.703702806881416,0.740707561268237,0,2.07986957055916,0,0.231860809950154,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0.839910640994298,0.141775097242386,0,0,1.53353071666084,0,0,0.621984346622316,0.864719720501769,1.13618190083742,0,0,0,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0,0.22001485746285,0,0,0.845302752556,0.26593811658487,1.04007436911366,0.257207374262142,0,0,0,1.08524321078289,0,0,0,0,1.20575750823834,0,0.799783929456456,0,0,0,0,0,0,0,0,0.537182889719687,0,0.197030760201927,0,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,1.03985430765404,0,0.473107245101804,0.585707074963566,0,2.27407504055985,0,0.664225598535437,0,0.0868836144680828,0.195801157462741,0,0.206768026122887,0,0,2.42502057157008,4.99306318531491,2.41912234663744,0.744323423456331,0.153461973288062,0.561320188866147,0.896974044789907,0,0.321707842287215,0,0.462629081407967,0,0.164254312027618,1.03850885836724,0.348631135379878,0.241718899183244,0.601519410909855,0.552485933615378,0.114814448164607,0,0.524497659837696,0.451199612907412,0.539107359730903,1.56869953835371,0,0.422206515571503,0,0.170093705276516,0,1.54227252690289,1.08378575017541,0.501689773854853,0.764628819135115,0,0.895499018888713,0,0,0.256450125116389,0,0,0.824328093181778,0,0,0,1.30012049207304,0,0.096670718292122,0,0.307007349452259,0.137836572484531,0.107420244868274,0.290033387828457,0.170453254832202,0.0890320356467374,0.165284915360978,0.768760269460425,1.53135254993501,0.4046311234222,0,0,0,0.308033580176089,0.532306030317022,0,0,0.286249773483982,0,0,0.190630193923825,0.767693373934002,0,0.95460974377781,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,1.68503382495592,0,0.487426979262569,0,0,0.282810863907425,0,0,0.66343897524122,0,0,0,0,0,0.281695602532241,0,0.294747123039363,0,0,0,0.329294892959902,0.379473173765715,0.699869440489966,0.384888450902048,0,0,0.941438007767792,0.86101074534246,0,2.21715076768338,0.459446800413919,0,0,0,0,0,0,0.540031437238115,0,0.213648142254946,0,0.245040215981032,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0.146508179271894,0.121360521749513,0,0.284136146806413,4.53614521001611,0.593929361665277,3.07160702099232,0,0.140669416410513,0,0,0.422250816255987,0.398495976502139,0,0.251932747854276,0.102268682502155,0,0,0.269605053441981,0,0,0.789147245095469,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0.120596438625408,0,0,0,0,0,0.83654246567162,0.769502585037971,0.227884111694002,0,0.269272933229316,0.651884231532048,0.31900115973192,0.274792780205587,1.5991043280559,0,0,0,0,0,0,0,0,0.632994193584081,0,0.282706142867882,0,0.995261931078505,0.796118080530053,0.611030144933625,0,0.123563938946503,0.104421949505455,0.067401132980677,0,0,0,0,0,1.57833761139756,1.20990716048664,0,0.126373159256976,0.300646838828985,0,0,0.330991955875499,0.313932918407225,0,0.284609546029793,0.277349346026277,1.90915712168644,0.195984794828755,0.7835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| ||
|short_description=p@chr1:26202447..26202459,- | |short_description=p@chr1:26202447..26202459,- | ||
}} | }} |
Latest revision as of 06:30, 28 July 2015
Short description: | p@chr1:26202447..26202459, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:26202447..26202459, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.35e-20 | 19 |
placental epithelial cell | 2.74e-14 | 3 |
amniotic epithelial cell | 4.92e-09 | 2 |
amnion mesenchymal stem cell | 2.43e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.38e-29 | 14 |
membranous layer | 5.38e-29 | 14 |
extraembryonic structure | 2.53e-19 | 24 |
placenta | 2.98e-18 | 4 |
allantois | 2.98e-18 | 4 |
chorion | 8.54e-16 | 7 |
amnion | 7.25e-15 | 7 |
somatic layer of lateral plate mesoderm | 5.66e-13 | 8 |
organ component layer | 2.08e-09 | 66 |
urinary system structure | 2.95e-07 | 47 |
renal system | 4.57e-07 | 48 |
female organism | 4.73e-07 | 41 |