FFCP PHASE1:Hg19::chr1:27939407..27939421,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:27939407..27939421,- | |||
|coexpression_cluster_id=C329 | |||
|description=CAGE_peak_at_chr1:27939407..27939421,- | |||
|id=chr1:27939407..27939421,- | |||
|ontology_enrichment_celltype=CL:0002057!1.34e-89!42;CL:0000860!9.89e-83!45;CL:0000766!7.02e-76!76;CL:0002194!1.30e-72!63;CL:0000576!1.30e-72!63;CL:0000040!1.30e-72!63;CL:0000559!1.30e-72!63;CL:0000738!5.93e-71!140;CL:0002087!1.23e-70!119;CL:0002009!5.81e-70!65;CL:0000839!1.00e-66!70;CL:0000557!1.36e-65!71;CL:0002031!2.04e-62!124;CL:0000037!3.09e-54!172;CL:0000566!3.09e-54!172;CL:0002032!8.24e-52!165;CL:0000837!8.24e-52!165;CL:0000988!3.26e-50!182;CL:0000763!1.38e-46!112;CL:0000049!1.38e-46!112;CL:0002393!3.34e-19!9;CL:0002397!3.34e-19!9;CL:0000134!4.95e-17!358;CL:0002320!2.40e-16!365;CL:0000219!6.13e-14!390;CL:0000048!4.36e-11!430;CL:0000723!1.10e-10!436;CL:0000034!3.62e-10!444;CL:0000775!2.41e-08!3;CL:0000094!1.49e-07!8;CL:0000875!1.65e-07!3;CL:0002396!1.65e-07!3;CL:0000842!4.91e-07!3;CL:0000838!6.26e-07!52;CL:0000542!9.91e-07!53;CL:0000051!9.91e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.55e-106;33!CL:0002057;7.55e-106;33!CL:0000473;1.79e-84;39!CL:0000234;1.79e-84;39!CL:0000576;6.24e-68;48!CL:0000766;1.10e-45;69!CL:0000763;1.40e-26;100!CL:0002087;1.41e-16;104!CL:0000775;1.03e-15;3!CL:0000738;3.77e-15;136!CL:0002393;8.02e-13;6!CL:0002397;8.02e-13;6!CL:0000094;3.28e-10;8!CL:0000988;1.12e-08;177!CL:0000219;3.03e-08;193!CL:0000081;1.95e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.04e-125,42;CL:0002057,7.04e-125,42;CL:0000473,1.15e-122,48;CL:0000234,1.15e-122,48;CL:0000766,1.49e-98,72;CL:0002194,1.03e-96,59;CL:0000576,1.03e-96,59;CL:0000040,1.03e-96,59;CL:0000559,1.03e-96,59;CL:0002009,2.31e-93,61;CL:0000839,7.29e-86,66;CL:0000557,1.70e-84,67;CL:0000763,1.44e-63,108;CL:0000049,1.44e-63,108;CL:0000738,7.16e-52,136;CL:0002087,1.71e-49,115;CL:0002031,2.53e-44,120;CL:0000037,1.27e-40,168;CL:0002032,2.53e-40,161;CL:0000837,2.53e-40,161;CL:0000988,3.46e-38,177;CL:0000775,8.49e-16,3;CL:0000134,2.72e-15,354;CL:0002320,7.62e-15,361;CL:0000219,2.89e-13,386;CL:0002393,5.76e-13,9;CL:0002397,5.76e-13,9;CL:0000048,2.49e-11,427;CL:0000723,4.61e-11,433;CL:0000034,1.02e-10,441;CL:0000094,2.78e-10,8;CL:0000081,1.74e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.51e-88;42!CL:0000049;8.43e-21;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.99e-73!102;UBERON:0003061!8.99e-73!102;UBERON:0002193!4.05e-67!112;UBERON:0002371!1.21e-56!80;UBERON:0001474!1.03e-51!86;UBERON:0002405!1.51e-43!115;UBERON:0004765!6.07e-42!101;UBERON:0001434!6.07e-42!101;UBERON:0003081!2.22e-25!216;UBERON:0002204!6.77e-21!167;UBERON:0002384!4.00e-16!375;UBERON:0000178!1.43e-12!15;UBERON:0000179!1.43e-12!15;UBERON:0000463!1.43e-12!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.78e-74,76;UBERON:0001474,6.25e-68,82;UBERON:0002390,8.44e-63,98;UBERON:0003061,8.44e-63,98;UBERON:0004765,2.52e-61,90;UBERON:0002405,3.88e-59,93;UBERON:0002193,2.30e-56,108;UBERON:0001434,1.54e-54,100;UBERON:0002204,7.08e-30,167;UBERON:0003081,1.21e-26,203;UBERON:0000926,1.69e-14,315;UBERON:0004120,1.69e-14,315;UBERON:0006603,1.69e-14,315;UBERON:0002384,3.11e-14,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0,0,0,0.77408061658038,0,0,0,0.154934401160603,0.710846162437108,0,0.553995408531877,1.40381113229099,0.434021741431704,0,0,0.257575567634187,3.34415949192999,1.88937971844405,1.69808842831471,3.71886459049095,0.822335776043652,2.16794459626573,2.8769239232215,2.81776777182011,1.41889337933151,1.72372840368309,1.29096936716765,1.35426486594342,4.32957380947991,2.18324920046277,0.898893937780338,2.44867113896722,0.320929027076094,1.27867425159808,1.9791078011203,1.79517291859469,1.27867425159808,3.19230162491442,1.70215567407342,2.4912889959823,3.51748131359441,1.5644487552606,2.38907729175628,3.63239701580021,1.10483290796269,1.26584954976354,1.47878700418359,2.55125159958052,1.25795187305026,1.01095768031846,1.80212271409808,0.16072558669708,0.855038231223746,2.38700012638908,0.547992461293902,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0.651083453856419,0,0,0.255973222308837,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0,6.32501818449095,0,0,0,0,0,0,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0,3.74503511973591,11.966458368161,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.72571360654893,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,1.70894156152249,0.714695326373367,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0,0,0,0,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:27939407..27939421,- | |||
}} |
Latest revision as of 06:47, 28 July 2015
Short description: | p@chr1:27939407..27939421, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:27939407..27939421, - |
Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.78e-74 | 76 |
bone element | 6.25e-68 | 82 |
hematopoietic system | 8.44e-63 | 98 |
blood island | 8.44e-63 | 98 |
skeletal element | 2.52e-61 | 90 |
immune system | 3.88e-59 | 93 |
hemolymphoid system | 2.30e-56 | 108 |
skeletal system | 1.54e-54 | 100 |
musculoskeletal system | 7.08e-30 | 167 |
lateral plate mesoderm | 1.21e-26 | 203 |
mesoderm | 1.69e-14 | 315 |
mesoderm-derived structure | 1.69e-14 | 315 |
presumptive mesoderm | 1.69e-14 | 315 |
connective tissue | 3.11e-14 | 371 |