FFCP PHASE1:Hg19::chr1:28573291..28573293,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:28573291..28573293,- | |||
|description=CAGE_peak_at_chr1:28573291..28573293,- | |description=CAGE_peak_at_chr1:28573291..28573293,- | ||
|id=chr1:28573291..28573293,- | |id=chr1:28573291..28573293,- | ||
|ontology_enrichment_celltype=CL:0000542!4.04e-12!53;CL:0000051!4.04e-12!53;CL:0000838!2.11e-11!52;CL:0000625!5.44e-07!11 | |ontology_enrichment_celltype=CL:0000542!4.04e-12!53;CL:0000051!4.04e-12!53;CL:0000838!2.11e-11!52;CL:0000625!5.44e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000625;5.41e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,5.20e-09,11 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.12e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;2.62e-23;1!DOID:74;2.31e-12;2!DOID:1287;8.14e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.67e-23,1;DOID:74,1.85e-12,2;DOID:1287,7.27e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;2.62e-23;1!UBERON:0003831;2.62e-23;1!UBERON:0003898;2.62e-23;1!UBERON:0004830;2.62e-23;1!UBERON:0003830;2.62e-23;1!UBERON:0005175;2.62e-23;1!UBERON:0001774;2.62e-23;1!UBERON:0001103;2.62e-23;1!UBERON:0005090;2.31e-12;2!UBERON:0001630;2.31e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,2.10e-23,1;UBERON:0003831,2.10e-23,1;UBERON:0003898,2.10e-23,1;UBERON:0004830,2.10e-23,1;UBERON:0003830,2.10e-23,1;UBERON:0005175,2.10e-23,1;UBERON:0001774,2.10e-23,1;UBERON:0001103,2.10e-23,1;UBERON:0010084,2.10e-23,1;UBERON:0005090,2.07e-12,2;UBERON:0001630,2.07e-12,2 | |||
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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.382067028739756,0.246301768349837,0.393553906568396,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0.200544447470142,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0,0,0.32592226663359,0.473447805734733,1.94826728407911,0,0,0.443067789167242,0,1.0247305578054,0.650296737799391,0.328875809207352,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0.318565414324097,0.651083453856419,0,0,0.383959833463255,1.24930726552346,0,1.64225599384209,0.403213486449465,0.802320587350522,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0.117434498643765,0,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0,0,0.201504196455281,0,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.394061520403854,0.646882724578552,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,1.03473071292505,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0.961416640147258,0,0,0.371606350251437,0,0.0711418433484141,0,0.199579371432817,0,0.423347165447766,0.324621940274555,0.561594356226918,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0.222886768554957,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0,0.552567831062295,0.251932747854276,0,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0.969332746095218,0,0,0,0,0,0.1137934482855,0.254253650292766,0.236387681767936,0.689486746482929,0.291604613383254,0,0,0,0,0,0,0,0.653630781113941,0.139423744278603,0,0,0,0.0897576444097721,0.217294743844016,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.176915129006678,0,0,0.123563938946503,0,0,1.60515529459758,0,0.364909578431332,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0.483781656445426,0.365446585430928,0.410577285266046,0,0,0.225980740780532,0,0,0,0,0.0801588202515337,0,0,0,0,0,0.288109595976299,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0.164831716762333,0.202210631562555,0,1.6087933092499,0,0.272406812223151,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0.105600336519406,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0,0,0.138348634936231,0,0,0,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0.489473409012935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0.139879507719444,0,0.127894371303652,0,0.157265941855896,0,0.169732529954025,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0,0,0,0.206686796501184,0,0,0.548257766857182,0,0,0.255524855279191,0,0.336283722218824,0,0.227662191351298,0,0.115233987555779,0,0,0,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0,1.26410889386181,0,0,0,0.207216164163037,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0.365753774946808,0,0.205325613712494,0,0.485710993059139,0.467878926924211,0.198950775161368,0.83244063544298,0.11294608203896,0,0,0,0.218559560503957,0,0,0,0,0,0.8453114551668,0,0,0.0644578879735772,0.299823467774787,0,0,0.160482733378337,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.20686599172379,0,0.23806443146374,0.0645889098360061,0.124149428591716,0.112131862580613,0.0636471582781649,0.404234377916439,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0.641136984606466 | ||
|short_description=p@chr1:28573291..28573293,- | |short_description=p@chr1:28573291..28573293,- | ||
}} | }} |
Latest revision as of 06:57, 28 July 2015
Short description: | p@chr1:28573291..28573293, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:28573291..28573293, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 5.20e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 2.10e-23 | 1 |
respiratory system muscle | 2.10e-23 | 1 |
skeletal muscle of trunk | 2.10e-23 | 1 |
respiratory system skeletal muscle | 2.10e-23 | 1 |
thoracic segment muscle | 2.10e-23 | 1 |
chest organ | 2.10e-23 | 1 |
muscle of trunk | 2.10e-23 | 1 |
diaphragm | 2.10e-23 | 1 |
future diaphragm | 2.10e-23 | 1 |
muscle structure | 2.07e-12 | 2 |
muscle organ | 2.07e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.67e-23 | 1 |
hematopoietic system disease | 1.85e-12 | 2 |
cardiovascular system disease | 7.27e-07 | 4 |