FFCP PHASE1:Hg19::chr1:47905805..47905807,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:47905805..47905807,+ | |||
|coexpression_cluster_id=C190 | |||
|description=CAGE_peak_at_chr1:47905805..47905807,+ | |||
|id=chr1:47905805..47905807,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002549;6.67e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,6.94e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.78e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;6.67e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,8.09e-09,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;1.78e-16;1!UBERON:0000059;2.02e-13;11!UBERON:0002360;6.67e-09;2!UBERON:0004903;6.67e-09;2!UBERON:0005629;6.67e-09;2!UBERON:0000094;6.67e-09;2!UBERON:0005358;6.67e-09;2!UBERON:0001886;6.67e-09;2!UBERON:0004086;6.67e-09;2!UBERON:0010743;6.67e-09;2!UBERON:0005282;6.67e-09;2!UBERON:0002173;6.67e-09;2!UBERON:0002186;6.67e-09;2!UBERON:0005281;6.67e-09;2!UBERON:0000160;2.00e-08;17!UBERON:0001155;6.66e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,1.41e-16,1;UBERON:0007645,1.41e-16,1;UBERON:0007647,1.41e-16,1;UBERON:0010115,1.41e-16,1;UBERON:0000059,2.02e-13,11;UBERON:0002360,5.94e-09,2;UBERON:0000094,5.94e-09,2;UBERON:0010743,5.94e-09,2;UBERON:0005629,6.94e-09,2;UBERON:0005358,6.94e-09,2;UBERON:0001886,6.94e-09,2;UBERON:0004086,6.94e-09,2;UBERON:0005282,6.94e-09,2;UBERON:0005281,6.94e-09,2;UBERON:0004903,8.09e-09,2;UBERON:0002173,8.09e-09,2;UBERON:0002186,8.09e-09,2;UBERON:0000160,2.00e-08,17;UBERON:0001155,6.55e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0.473447805734733,0,0.111410456885174,0,0.443067789167242,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0.253019692019503,0,0.651083453856419,0,0,0,0,0,0.821127996921047,0,0,0.144824403882799,0,0,0,0.722878304769133,0,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.908144565869588,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0.877955241761676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0.110293972732394,0.435758888184812,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0.43596006883328,0.2933531432838,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.112085143993527,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0,0,0,0,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0.435050081742686,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,1.92495971052672,0,0,0,0.142283686696828,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0.500547425135725,0.19538809540204,0,0,0,0,0,0.18714054040822,0,0,0.334330152832435,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0.211125408127993,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0.0927680981618513,0,0,0.262379999988587,0,0.1137934482855,1.01701460117107,0.945550727071745,2.41320361269025,0,0,0,0,0,0,0,0.438770794307945,0,0,0.0769502585037971,0,0,0,0.54323685961004,0,0,0,0,0,0,0,0.784250137270958,0,0,0,0,0,0.565412285735763,0,3.98104772431402,0.442287822516696,6.11030144933625,0.593042257361244,0,0.104421949505455,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0.30607276163049,1.32691817219825,0,0.72581733978073,0.664653872707185,0.330991955875499,0,0,0,0,0,0.391969589657511,0,0,0.171986032471617,0.0967563312890851,0.146178634172371,0,0,0,0.225980740780532,0.274083849293502,0.19871461170299,0.0633107959558787,0,0,0.213452994739353,0,0,0.114536596165916,0,0.14405479798815,0,0.235694034616795,0,0,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.492137407573744,0,0.795229689809303,0,0,0,0,0,0,0,0,0.0788057072991982,0.262272940674991,0,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,1.80603545648546,0,0.226624183040251,0,0,0,0,0.513260513652988,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443716206147409,0,0,0,0.151649117541648,0.285465333544967,0.235265819698172,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0.385239660814607,0,0,0,0,0,0,0,0.219284049578707,0,0.38582807654183,0.506827321959218,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.371807292777007,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0.392590874004102,0,0,0.115525666150338,0,0.690359926060101,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0.078493092850514,0,0,3.65263488203798,0,0,1.00067161847319,0,0,0,0,0,0,0.691259661814092,0,0,0.0852134047591577,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0.356760272332706,0,0,0,0,0.437119121007915,0,0.245148321753905,0,0,0,2.5359343655004,0.169927114687817,0,0,0,0,0.352894871715692,0,0,0,0,1.10440093535229,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,0,0,0,0,0,0,0.342233301085281,0,0.0717222053926763,0.665320713092027,0,0,0,0.179650404213174,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr1:47905805..47905807,+ | |||
}} |
Latest revision as of 08:53, 28 July 2015
Short description: | p@chr1:47905805..47905807, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:47905805..47905807, + |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 6.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
dura mater | 1.41e-16 | 1 |
future meninx | 1.41e-16 | 1 |
ectomeninx | 1.41e-16 | 1 |
future dura mater | 1.41e-16 | 1 |
large intestine | 2.02e-13 | 11 |
meninx | 5.94e-09 | 2 |
membrane organ | 5.94e-09 | 2 |
meningeal cluster | 5.94e-09 | 2 |
vascular plexus | 6.94e-09 | 2 |
ventricle of nervous system | 6.94e-09 | 2 |
choroid plexus | 6.94e-09 | 2 |
brain ventricle | 6.94e-09 | 2 |
ventricular system of brain | 6.94e-09 | 2 |
ventricular system of central nervous system | 6.94e-09 | 2 |
bronchoalveolar duct junction | 8.09e-09 | 2 |
alveolar duct | 8.09e-09 | 2 |
bronchiole | 8.09e-09 | 2 |
intestine | 2.00e-08 | 17 |
colon | 6.55e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 8.09e-09 | 2 |