FFCP PHASE1:Hg19::chr1:85742270..85742309,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-88bp_to_ENST00000427819,uc001dla.1_5end | |association_with_transcript=-88bp_to_ENST00000427819,uc001dla.1_5end | ||
|cluster_id=chr1:85742270..85742309,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_2_at_ENST00000427819_5end,CAGE_peak_2_at_uc001dla.1_5end | |description=CAGE_peak_2_at_ENST00000427819_5end,CAGE_peak_2_at_uc001dla.1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002581;7.06e-34;1!CL:0002543;8.97e-07;6 | |ontology_enrichment_celltype_v019=CL:0002581;7.06e-34;1!CL:0002543;8.97e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002581,7.06e-34,1;CL:0002543,8.48e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | |ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0005406;1.07e-17;2!UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0005406;1.07e-17;2!UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,1.07e-17,2;UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0.286235987131057,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0.223915474239924,0,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0.344745680736619,0.645484683583826,0,0,0.272906150057846,0,0,0,0.639337125799041,0.329851300186716,0,0,0,1.13477044938228,0.622822248995575,0,0.521482918420201,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,6.61444331263449,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0.488124115096339,0,0,0.0892997282840798,0,0,1.53316637465883,0,0.366403487860815,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.577465791044295,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,1.48418066444991,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0.251932747854276,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0,0.269272933229316,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0,0.0882561266915003,0,0,0,0,0,0.160317640503067,0,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0.203996435272644,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0,0,0,0,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0.109209638192014,0.169732529954025,0,0,0,0,0.0788617450012534,0,0,0,0.256916900385838,0,0,0,0.504143392443436,0,0.161475645631851,0,0.0981477185010256,0,0,0,0,0.690359926060101,0,0.225630985047772,0.40341013740704,0,0,0,0,0.202612753855184,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0.115233987555779,0,0.135939465953663,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0,0.233939463462106,0.198950775161368,0.118920090777569,0,0.219881033490858,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0.135982980381829,0.436350690340377,0,0,0,0,0.252332849670158,0,0.126698501011437,0,0.26721740526556,0.0918948995348449,0,10.3816816558988,27.064377145774,0,0,0.213233981900981,0.23806443146374,0.0645889098360061,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0.286235987131057,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0.223915474239924,0,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0.344745680736619,0.645484683583826,0,0,0.272906150057846,0,0,0,0.639337125799041,0.329851300186716,0,0,0,1.13477044938228,0.622822248995575,0,0.521482918420201,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,6.61444331263449,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0.488124115096339,0,0,0.0892997282840798,0,0,1.53316637465883,0,0.366403487860815,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.577465791044295,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,1.48418066444991,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0.251932747854276,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0,0.269272933229316,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0,0.0882561266915003,0,0,0,0,0,0.160317640503067,0,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0.203996435272644,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0,0,0,0,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0.109209638192014,0.169732529954025,0,0,0,0,0.0788617450012534,0,0,0,0.256916900385838,0,0,0,0.504143392443436,0,0.161475645631851,0,0.0981477185010256,0,0,0,0,0.690359926060101,0,0.225630985047772,0.40341013740704,0,0,0,0,0.202612753855184,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0.115233987555779,0,0.135939465953663,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0,0.233939463462106,0.198950775161368,0.118920090777569,0,0.219881033490858,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0.135982980381829,0.436350690340377,0,0,0,0,0.252332849670158,0,0.126698501011437,0,0.26721740526556,0.0918948995348449,0,10.3816816558988,27.064377145774,0,0,0.213233981900981,0.23806443146374,0.0645889098360061,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | ||
|short_description=p2@ENST00000427819,p2@uc001dla.1 | |short_description=p2@ENST00000427819,p2@uc001dla.1 | ||
}} | }} |
Latest revision as of 10:48, 28 July 2015
Short description: | p2@ENST00000427819, p2@uc001dla.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000427819_5end, CAGE_peak_2_at_uc001dla.1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -88bp_to_ENST00000427819, uc001dla.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 7.06e-34 | 1 |
vein endothelial cell | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 1.07e-17 | 2 |
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |