FFCP PHASE1:Hg19::chr1:94994950..94994968,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:94994950..94994968,- | |||
|description=CAGE_peak_at_chr1:94994950..94994968,- | |description=CAGE_peak_at_chr1:94994950..94994968,- | ||
|id=chr1:94994950..94994968,- | |id=chr1:94994950..94994968,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000312;2.41e-14;5!CL:0000240;4.07e-12;6!CL:0000311;4.07e-12;6!CL:0000079;4.07e-12;6!CL:0000237;4.07e-12;6!CL:0002549;1.44e-09;2!CL:0000362;2.20e-08;9!CL:0002621;6.32e-07;3!CL:0002567;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000312,2.41e-14,5;CL:0000240,4.07e-12,6;CL:0000311,4.07e-12,6;CL:0000079,4.07e-12,6;CL:0000237,4.07e-12,6;CL:0000036,4.07e-12,6;CL:0000357,4.07e-12,6;CL:0000114,4.07e-12,6;CL:0002549,1.86e-09,2;CL:0000362,2.20e-08,9;CL:0002621,6.50e-07,3;CL:0002567,7.70e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;4.07e-12;6!CL:0000114;4.07e-12;6!UBERON:0006241;8.62e-07;3!UBERON:0003057;8.62e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!1.78e-07!511 | |ontology_enrichment_uberon=UBERON:0000062!1.78e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0005629;1.44e-09;2!UBERON:0005358;1.44e-09;2!UBERON:0001886;1.44e-09;2!UBERON:0004086;1.44e-09;2!UBERON:0005282;1.44e-09;2!UBERON:0005281;1.44e-09;2!UBERON:0001949;6.32e-07;3!UBERON:0001896;8.62e-07;3!UBERON:0002240;8.62e-07;3!UBERON:0005174;8.62e-07;3!UBERON:0005290;8.62e-07;3!UBERON:0001137;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,1.86e-09,2;UBERON:0005358,1.86e-09,2;UBERON:0001886,1.86e-09,2;UBERON:0004086,1.86e-09,2;UBERON:0005282,1.86e-09,2;UBERON:0005281,1.86e-09,2;UBERON:0001949,6.50e-07,3;UBERON:0002240,7.28e-07,3;UBERON:0005174,7.28e-07,3;UBERON:0001137,7.28e-07,3;UBERON:0001896,9.64e-07,3;UBERON:0005290,9.64e-07,3;UBERON:0010096,9.64e-07,3 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0.512321413058201,0.236482229888585,0.344745680736619,0,0,0,0,0,0.612167784741805,0.320929027076094,0,0,0,0,1.45104619314292,0.56738522469114,2.4912889959823,0,0,0.217188844705117,0.605399502633369,0,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0,0,0,1.05950199351452,0,0,0,0.570471821544449,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.640672166455702,0.211931901159562,0,0,0,0.18611685633159,0.168776332241266,0,1.00973509697646,0.552299391853796,0,0,0,0,0.773043412653187,2.45471508531751,0.573609190778008,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51200913307602,0,1.40740561376283,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0.93733833986777,0.16798212819886,0.283550194484773,0.179117045405697,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0.248107807818777,0,0,0.384417447767103,0,0.160853921143607,0,0,0,0,0.519254429183621,0.232420756919918,0,0.601519410909855,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15699440752685,0.576570202095319,1.78657797492418,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0.443430153536676,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0.0898683511473268,0.716084698702437,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0.34823682632161,0,0,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0.720599767084807,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0.157204305099666,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,1.14681839138014,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0,0.310874401165561,0,0,0,0,0,0,0,0,0.761610424337591,0.406870733204662,0.363697318405119,0,0,0.796191777397232,0,0,0,0,0.192619830407303,0,0,0,0,0.734210113519403,0,0,0,0.353378291891762,0.578742114812744,0,0,0,0.303859956177382,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.6124909547064,0.0642292250964595,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0.11796972334774,0.183428598521679,0.231051332300676,0,0,0,0,0,0,0,0.655087670040387,0.443568258651136,0,0,0.413373593002368,0,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0,0.177404740325278,0,0.171488009437418,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.4582137370881,0.62041277132864,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.905777061400041,0,0,0,0,0,1.76677620403451,0.297046400327086,0,0,0,0,0,0.892769693028288,0.352894871715692,0.0802413666891683,0,0,0.143339583151451,0,0.0679914901909147,0,0,0.371995018166751,0,0,0,0.218531143927391,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0.560659312903067,0,0.202117188958219,0,0,0.134704106029175,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0.244482888365733,0,0,0,0 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|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0.512321413058201,0.236482229888585,0.344745680736619,0,0,0,0,0,0.612167784741805,0.320929027076094,0,0,0,0,1.45104619314292,0.56738522469114,2.4912889959823,0,0,0.217188844705117,0.605399502633369,0,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0,0,0,1.05950199351452,0,0,0,0.570471821544449,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.640672166455702,0.211931901159562,0,0,0,0.18611685633159,0.168776332241266,0,1.00973509697646,0.552299391853796,0,0,0,0,0.773043412653187,2.45471508531751,0.573609190778008,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51200913307602,0,1.40740561376283,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0.93733833986777,0.16798212819886,0.283550194484773,0.179117045405697,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0.248107807818777,0,0,0.384417447767103,0,0.160853921143607,0,0,0,0,0.519254429183621,0.232420756919918,0,0.601519410909855,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15699440752685,0.576570202095319,1.78657797492418,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0.443430153536676,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0.0898683511473268,0.716084698702437,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0.34823682632161,0,0,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0.720599767084807,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0.157204305099666,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,1.14681839138014,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0,0.310874401165561,0,0,0,0,0,0,0,0,0.761610424337591,0.406870733204662,0.363697318405119,0,0,0.796191777397232,0,0,0,0,0.192619830407303,0,0,0,0,0.734210113519403,0,0,0,0.353378291891762,0.578742114812744,0,0,0,0.303859956177382,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.6124909547064,0.0642292250964595,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0.11796972334774,0.183428598521679,0.231051332300676,0,0,0,0,0,0,0,0.655087670040387,0.443568258651136,0,0,0.413373593002368,0,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0,0.177404740325278,0,0.171488009437418,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.4582137370881,0.62041277132864,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.905777061400041,0,0,0,0,0,1.76677620403451,0.297046400327086,0,0,0,0,0,0.892769693028288,0.352894871715692,0.0802413666891683,0,0,0.143339583151451,0,0.0679914901909147,0,0,0.371995018166751,0,0,0,0.218531143927391,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0.560659312903067,0,0.202117188958219,0,0,0.134704106029175,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p@chr1:94994950..94994968,- | |short_description=p@chr1:94994950..94994968,- | ||
}} | }} |
Latest revision as of 11:32, 28 July 2015
Short description: | p@chr1:94994950..94994968, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:94994950..94994968, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 2.41e-14 | 5 |
stratified squamous epithelial cell | 4.07e-12 | 6 |
keratin accumulating cell | 4.07e-12 | 6 |
stratified epithelial cell | 4.07e-12 | 6 |
keratinizing barrier epithelial cell | 4.07e-12 | 6 |
epithelial fate stem cell | 4.07e-12 | 6 |
stratified epithelial stem cell | 4.07e-12 | 6 |
surface ectodermal cell | 4.07e-12 | 6 |
fibroblast of choroid plexus | 1.86e-09 | 2 |
epidermal cell | 2.20e-08 | 9 |
gingival epithelial cell | 6.50e-07 | 3 |
light melanocyte | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 1.86e-09 | 2 |
ventricle of nervous system | 1.86e-09 | 2 |
choroid plexus | 1.86e-09 | 2 |
brain ventricle | 1.86e-09 | 2 |
ventricular system of brain | 1.86e-09 | 2 |
ventricular system of central nervous system | 1.86e-09 | 2 |
gingival epithelium | 6.50e-07 | 3 |
spinal cord | 7.28e-07 | 3 |
dorsal region element | 7.28e-07 | 3 |
dorsum | 7.28e-07 | 3 |
medulla oblongata | 9.64e-07 | 3 |
myelencephalon | 9.64e-07 | 3 |
future myelencephalon | 9.64e-07 | 3 |