FFCP PHASE1:Hg19::chr20:25176603..25176614,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:25176603..25176614,+ | |||
|description=CAGE_peak_at_chr20:25176603..25176614,+ | |description=CAGE_peak_at_chr20:25176603..25176614,+ | ||
|id=chr20:25176603..25176614,+ | |id=chr20:25176603..25176614,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002363;1.33e-17;2!CL:0002032;1.15e-09;1!CL:0002550;1.15e-09;1!CL:0000557;1.15e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,1.59e-17,2;CL:0000008,1.59e-17,2;CL:0002550,6.31e-10,1 | |||
|ontology_enrichment_development_v019=CL:0000008;1.33e-17;2!UBERON:0010227;1.15e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;4.62e-18;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,8.08e-18,2 | |||
|ontology_enrichment_uberon=UBERON:0000062!2.54e-08!511;UBERON:0003075!1.31e-07!86;UBERON:0007284!1.31e-07!86;UBERON:0000481!9.15e-07!347 | |ontology_enrichment_uberon=UBERON:0000062!2.54e-08!511;UBERON:0003075!1.31e-07!86;UBERON:0007284!1.31e-07!86;UBERON:0000481!9.15e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0003891;2.74e-19;4!UBERON:0000964;2.74e-19;4!UBERON:0010409;2.74e-19;4!UBERON:0003566;1.33e-17;2!UBERON:0001777;1.33e-17;2!UBERON:0001801;1.03e-09;14!UBERON:0002079;1.15e-09;1!UBERON:0010313;4.87e-08;10!UBERON:0000019;3.42e-07;19!UBERON:0000047;3.42e-07;19!UBERON:0004088;3.42e-07;19!UBERON:0010230;3.42e-07;19!UBERON:0000970;7.74e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000964,2.76e-19,4;UBERON:0010409,2.76e-19,4;UBERON:0004348,2.76e-19,4;UBERON:0005427,2.76e-19,4;UBERON:0003891,5.84e-19,4;UBERON:0003566,1.59e-17,2;UBERON:0001777,1.59e-17,2;UBERON:0001801,1.01e-09,14;UBERON:0002079,1.15e-09,1;UBERON:0010313,4.88e-08,10;UBERON:0002342,4.88e-08,10;UBERON:0005062,4.88e-08,10;UBERON:0000019,7.63e-07,20;UBERON:0000047,7.63e-07,20;UBERON:0010312,7.63e-07,20;UBERON:0004088,7.63e-07,20;UBERON:0010230,7.63e-07,20;UBERON:0003072,7.63e-07,20;UBERON:0004128,7.63e-07,20;UBERON:0003071,7.63e-07,20 | |||
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| ||
|short_description=p@chr20:25176603..25176614,+ | |short_description=p@chr20:25176603..25176614,+ | ||
}} | }} |
Latest revision as of 12:41, 28 July 2015
Short description: | p@chr20:25176603..25176614, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:25176603..25176614, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 1.59e-17 | 2 |
migratory cranial neural crest cell | 1.59e-17 | 2 |
fibroblast of the conjuctiva | 6.31e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
cornea | 2.76e-19 | 4 |
eye surface | 2.76e-19 | 4 |
optic eminence | 2.76e-19 | 4 |
corneal primordium | 2.76e-19 | 4 |
stroma | 5.84e-19 | 4 |
head connective tissue | 1.59e-17 | 2 |
substantia propria of cornea | 1.59e-17 | 2 |
anterior segment of eyeball | 1.01e-09 | 14 |
left cardiac atrium | 1.15e-09 | 1 |
neural crest-derived structure | 4.88e-08 | 10 |
neural crest | 4.88e-08 | 10 |
neural fold | 4.88e-08 | 10 |
camera-type eye | 7.63e-07 | 20 |
simple eye | 7.63e-07 | 20 |
immature eye | 7.63e-07 | 20 |
ocular region | 7.63e-07 | 20 |
eyeball of camera-type eye | 7.63e-07 | 20 |
optic cup | 7.63e-07 | 20 |
optic vesicle | 7.63e-07 | 20 |
eye primordium | 7.63e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 8.08e-18 | 2 |