FFCP PHASE1:Hg19::chr20:34330534..34330580,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:34330534..34330580,+ | |||
|coexpression_cluster_id=C875 | |||
|description=CAGE_peak_at_chr20:34330534..34330580,+ | |description=CAGE_peak_at_chr20:34330534..34330580,+ | ||
|id=chr20:34330534..34330580,+ | |id=chr20:34330534..34330580,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.36e-46!140;CL:0000988!2.53e-38!182;CL:0000037!5.37e-38!172;CL:0000566!5.37e-38!172;CL:0002031!5.45e-37!124;CL:0002032!2.08e-34!165;CL:0000837!2.08e-34!165;CL:0002087!5.15e-34!119;CL:0000860!1.34e-24!45;CL:0002057!2.37e-24!42;CL:0000766!1.37e-22!76;CL:0000839!1.42e-18!70;CL:0000557!5.91e-18!71;CL:0000763!1.56e-17!112;CL:0000049!1.56e-17!112;CL:0002009!9.19e-17!65;CL:0000838!9.76e-17!52;CL:0000542!1.64e-16!53;CL:0000051!1.64e-16!53;CL:0002194!9.69e-16!63;CL:0000576!9.69e-16!63;CL:0000040!9.69e-16!63;CL:0000559!9.69e-16!63;CL:0002320!2.31e-15!365;CL:0000134!2.42e-15!358;CL:0000034!1.86e-13!444;CL:0000219!4.08e-13!390;CL:0000003!6.75e-13!722;CL:0000048!1.24e-12!430;CL:0000723!1.52e-12!436;CL:0000791!2.07e-09!18;CL:0000789!2.07e-09!18;CL:0002420!2.07e-09!18;CL:0002419!2.07e-09!18;CL:0000790!2.07e-09!18;CL:0000945!5.26e-09!24;CL:0000826!5.26e-09!24;CL:0000236!1.56e-07!14;CL:0000084!2.12e-07!25;CL:0000827!2.12e-07!25;CL:0002393!4.33e-07!9;CL:0002397!4.33e-07!9;CL:0000144!5.19e-07!625;CL:0000625!6.37e-07!11 | |ontology_enrichment_celltype=CL:0000738!4.36e-46!140;CL:0000988!2.53e-38!182;CL:0000037!5.37e-38!172;CL:0000566!5.37e-38!172;CL:0002031!5.45e-37!124;CL:0002032!2.08e-34!165;CL:0000837!2.08e-34!165;CL:0002087!5.15e-34!119;CL:0000860!1.34e-24!45;CL:0002057!2.37e-24!42;CL:0000766!1.37e-22!76;CL:0000839!1.42e-18!70;CL:0000557!5.91e-18!71;CL:0000763!1.56e-17!112;CL:0000049!1.56e-17!112;CL:0002009!9.19e-17!65;CL:0000838!9.76e-17!52;CL:0000542!1.64e-16!53;CL:0000051!1.64e-16!53;CL:0002194!9.69e-16!63;CL:0000576!9.69e-16!63;CL:0000040!9.69e-16!63;CL:0000559!9.69e-16!63;CL:0002320!2.31e-15!365;CL:0000134!2.42e-15!358;CL:0000034!1.86e-13!444;CL:0000219!4.08e-13!390;CL:0000003!6.75e-13!722;CL:0000048!1.24e-12!430;CL:0000723!1.52e-12!436;CL:0000791!2.07e-09!18;CL:0000789!2.07e-09!18;CL:0002420!2.07e-09!18;CL:0002419!2.07e-09!18;CL:0000790!2.07e-09!18;CL:0000945!5.26e-09!24;CL:0000826!5.26e-09!24;CL:0000236!1.56e-07!14;CL:0000084!2.12e-07!25;CL:0000827!2.12e-07!25;CL:0002393!4.33e-07!9;CL:0002397!4.33e-07!9;CL:0000144!5.19e-07!625;CL:0000625!6.37e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.35e-18;33!CL:0002057;3.35e-18;33!CL:0000576;1.17e-14;48!CL:0000473;1.01e-12;39!CL:0000234;1.01e-12;39!CL:0002087;1.95e-12;104!CL:0000766;2.09e-12;69!CL:0000542;3.14e-10;53!CL:0000791;5.21e-10;18!CL:0000789;5.21e-10;18!CL:0002419;5.21e-10;18!CL:0000738;5.25e-10;136!CL:0000945;5.47e-09;24!CL:0000236;5.65e-08;13!CL:0000084;1.95e-07;25!CL:0000625;2.50e-07;11!CL:0000988;3.46e-07;177!CL:0000094;4.43e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.04e-47,136;CL:0000988,6.51e-39,177;CL:0000037,7.52e-39,168;CL:0002031,3.53e-38,120;CL:0002032,4.15e-35,161;CL:0000837,4.15e-35,161;CL:0002087,4.66e-35,115;CL:0000860,1.77e-25,42;CL:0002057,1.77e-25,42;CL:0000766,5.98e-24,72;CL:0000473,4.75e-21,48;CL:0000234,4.75e-21,48;CL:0000839,1.16e-19,66;CL:0000557,3.17e-19,67;CL:0000763,4.19e-18,108;CL:0000049,4.19e-18,108;CL:0002009,9.54e-18,61;CL:0000838,1.01e-16,52;CL:0002194,1.18e-16,59;CL:0000576,1.18e-16,59;CL:0000040,1.18e-16,59;CL:0000559,1.18e-16,59;CL:0000542,1.68e-16,53;CL:0000051,1.68e-16,53;CL:0002320,8.54e-15,361;CL:0000134,1.27e-14,354;CL:0000219,3.34e-12,386;CL:0000034,3.60e-12,441;CL:0000048,1.55e-11,427;CL:0000723,2.11e-11,433;CL:0000791,8.47e-10,18;CL:0000789,8.47e-10,18;CL:0002420,8.47e-10,18;CL:0002419,8.47e-10,18;CL:0000790,8.47e-10,18;CL:0000945,2.25e-09,24;CL:0000826,2.25e-09,24;CL:0000236,7.88e-08,14;CL:0002393,2.31e-07,9;CL:0002397,2.31e-07,9;CL:0000625,3.45e-07,11;CL:0000084,5.08e-07,25;CL:0000827,5.08e-07,25;CL:0000094,5.71e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;7.76e-19;42!CL:0000051;3.14e-10;53!CL:0000790;5.21e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.48e-24!102;UBERON:0003061!7.48e-24!102;UBERON:0002193!1.61e-22!112;UBERON:0002371!5.98e-18!80;UBERON:0002405!1.16e-15!115;UBERON:0001474!6.01e-15!86;UBERON:0002384!5.28e-14!375;UBERON:0004765!1.59e-11!101;UBERON:0001434!1.59e-11!101;UBERON:0003081!3.39e-08!216;UBERON:0000178!8.57e-07!15;UBERON:0000179!8.57e-07!15;UBERON:0000463!8.57e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.58e-07;15!UBERON:0000179;6.58e-07;15!UBERON:0000463;6.58e-07;15 | |||
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| ||
|short_description=p@chr20:34330534..34330580,+ | |short_description=p@chr20:34330534..34330580,+ | ||
}} | }} |
Latest revision as of 13:28, 28 July 2015
Short description: | p@chr20:34330534..34330580, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:34330534..34330580, + |
Coexpression cluster: | C875_Eosinophils_Neutrophils_Mast_CD19_CD14_Basophils_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.34e-25 | 98 |
blood island | 3.34e-25 | 98 |
hemolymphoid system | 1.36e-23 | 108 |
bone marrow | 4.02e-19 | 76 |
immune system | 6.09e-18 | 93 |
bone element | 2.14e-16 | 82 |
skeletal element | 2.23e-15 | 90 |
connective tissue | 1.62e-13 | 371 |
skeletal system | 8.96e-12 | 100 |
lateral plate mesoderm | 1.84e-10 | 203 |
blood | 4.71e-07 | 15 |
haemolymphatic fluid | 4.71e-07 | 15 |
organism substance | 4.71e-07 | 15 |