FFCP PHASE1:Hg19::chr20:36779386..36779404,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:36779386..36779404,-
|short_description=p@chr20:36779386..36779404,-
|description=CAGE_peak_at_chr20:36779386..36779404,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:36779386..36779404,- | |||
|coexpression_cluster_id=C454 | |||
|description=CAGE_peak_at_chr20:36779386..36779404,- | |||
|id=chr20:36779386..36779404,- | |||
|ontology_enrichment_celltype=CL:0000192!2.09e-15!42;CL:0000514!2.09e-15!42;CL:0000222!3.31e-14!119;CL:0000359!7.21e-13!32;CL:0000183!8.75e-11!59;CL:0000680!6.92e-10!57;CL:0000056!6.92e-10!57;CL:0000355!6.92e-10!57;CL:0000187!2.07e-09!54;CL:0002078!6.50e-09!44;CL:0000115!9.12e-09!35;CL:0002139!1.61e-08!24;CL:0000220!1.64e-08!246;CL:0002321!3.51e-08!248;CL:0000393!1.56e-07!60;CL:0000211!1.56e-07!60;CL:1000497!5.04e-07!18;CL:0002518!5.04e-07!18;CL:0002681!7.91e-07!13;CL:0002584!7.91e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.28e-11;19!CL:0000115;3.28e-11;36!CL:0000359;8.66e-10;32!CL:0002188;8.83e-09;5!CL:1000746;9.21e-09;7!CL:1000612;9.21e-09;7!CL:0002139;1.80e-08;24!CL:0000192;2.96e-08;43!CL:0002078;3.99e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.20e-11,36;CL:0000349,1.35e-11,19;CL:0000222,7.20e-11,121;CL:0000192,1.34e-10,43;CL:0000514,1.34e-10,43;CL:0000359,3.69e-10,32;CL:0002078,1.73e-09,45;CL:0002188,8.22e-09,5;CL:1000746,9.07e-09,7;CL:1000612,9.07e-09,7;CL:0002139,2.38e-08,24;CL:0000187,3.84e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000514;2.96e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001637;2.26e-12;42!UBERON:0003509;2.26e-12;42!UBERON:0004572;2.26e-12;42!UBERON:0005631;6.64e-11;10!UBERON:0000158;6.64e-11;10!UBERON:0004573;8.46e-11;33!UBERON:0004571;8.46e-11;33!UBERON:0000478;3.49e-10;24!UBERON:0002049;5.83e-09;75!UBERON:0007798;5.83e-09;75!UBERON:0003914;8.52e-09;74!UBERON:0000074;9.21e-09;7!UBERON:0001229;9.21e-09;7!UBERON:0007500;4.52e-08;56!UBERON:0001981;4.52e-08;56!UBERON:0004537;4.52e-08;56!UBERON:0000055;1.19e-07;65 | |||
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| ||
|short_description=p@chr20:36779386..36779404,- | |||
}} | }} |
Latest revision as of 13:51, 28 July 2015
Short description: | p@chr20:36779386..36779404, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:36779386..36779404, - |
Coexpression cluster: | C454_Placental_Amniotic_Smooth_Mesenchymal_Lens_Renal_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.20e-11 | 36 |
extraembryonic cell | 1.35e-11 | 19 |
mesodermal cell | 7.20e-11 | 121 |
smooth muscle cell | 1.34e-10 | 43 |
smooth muscle myoblast | 1.34e-10 | 43 |
vascular associated smooth muscle cell | 3.69e-10 | 32 |
meso-epithelial cell | 1.73e-09 | 45 |
glomerular endothelial cell | 8.22e-09 | 5 |
glomerular cell | 9.07e-09 | 7 |
kidney corpuscule cell | 9.07e-09 | 7 |
endothelial cell of vascular tree | 2.38e-08 | 24 |
muscle cell | 3.84e-07 | 55 |