FFCP PHASE1:Hg19::chr20:50140219..50140238,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:50140219..50140238,- | |||
|description=CAGE_peak_at_chr20:50140219..50140238,- | |description=CAGE_peak_at_chr20:50140219..50140238,- | ||
|id=chr20:50140219..50140238,- | |id=chr20:50140219..50140238,- | ||
|ontology_enrichment_celltype=CL:0000838!1.19e-09!52;CL:0000542!2.52e-09!53;CL:0000051!2.52e-09!53;CL:0002274!1.54e-08!5;CL:0000457!1.54e-08!5;CL:0002191!1.54e-08!5;CL:0000097!1.54e-08!5;CL:0000831!1.54e-08!5;CL:0002028!1.54e-08!5;CL:0000080!5.79e-08!6;CL:0000084!3.20e-07!25;CL:0000827!3.20e-07!25;CL:0000791!6.40e-07!18;CL:0000789!6.40e-07!18;CL:0002420!6.40e-07!18;CL:0002419!6.40e-07!18;CL:0000790!6.40e-07!18 | |ontology_enrichment_celltype=CL:0000838!1.19e-09!52;CL:0000542!2.52e-09!53;CL:0000051!2.52e-09!53;CL:0002274!1.54e-08!5;CL:0000457!1.54e-08!5;CL:0002191!1.54e-08!5;CL:0000097!1.54e-08!5;CL:0000831!1.54e-08!5;CL:0002028!1.54e-08!5;CL:0000080!5.79e-08!6;CL:0000084!3.20e-07!25;CL:0000827!3.20e-07!25;CL:0000791!6.40e-07!18;CL:0000789!6.40e-07!18;CL:0002420!6.40e-07!18;CL:0002419!6.40e-07!18;CL:0000790!6.40e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.72e-59;5!CL:0000163;4.00e-33;9!CL:0000625;4.03e-10;11!CL:0000084;1.08e-07;25!CL:0000151;1.08e-07;36!CL:0002545;3.92e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.37e-59,5;CL:0002028,1.37e-59,5;CL:0000163,3.52e-33,9;CL:0000625,3.91e-10,11;CL:0002031,1.89e-08,120;CL:0000151,2.91e-08,36;CL:0000084,1.10e-07,25;CL:0000827,1.10e-07,25;CL:0000738,2.62e-07,136;CL:0002545,4.17e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;5.37e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;3.92e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.09e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.40e-11!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;5.37e-13;1!UBERON:0001154;5.37e-13;1!UBERON:0001153;5.37e-13;1!UBERON:0009854;5.37e-13;1!UBERON:0005800;3.92e-07;2!UBERON:0001515;3.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.76e-13,1;UBERON:0001154,5.38e-13,1;UBERON:0001153,5.38e-13,1;UBERON:0001045,5.38e-13,1;UBERON:0005800,4.17e-07,2;UBERON:0001515,4.17e-07,2 | |||
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| ||
|short_description=p@chr20:50140219..50140238,- | |short_description=p@chr20:50140219..50140238,- | ||
}} | }} |
Latest revision as of 15:19, 28 July 2015
Short description: | p@chr20:50140219..50140238, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:50140219..50140238, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.37e-59 | 5 |
basophil mast progenitor cell | 1.37e-59 | 5 |
endocrine cell | 3.52e-33 | 9 |
CD8-positive, alpha-beta T cell | 3.91e-10 | 11 |
hematopoietic lineage restricted progenitor cell | 1.89e-08 | 120 |
secretory cell | 2.91e-08 | 36 |
T cell | 1.10e-07 | 25 |
pro-T cell | 1.10e-07 | 25 |
leukocyte | 2.62e-07 | 136 |
thoracic aorta endothelial cell | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymph node | 3.76e-13 | 1 |
vermiform appendix | 5.38e-13 | 1 |
caecum | 5.38e-13 | 1 |
midgut | 5.38e-13 | 1 |
segment of aorta | 4.17e-07 | 2 |
thoracic aorta | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.09e-07 | 2 |