FFCP PHASE1:Hg19::chr20:56227631..56227651,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:56227631..56227651,- | |||
|description=CAGE_peak_at_chr20:56227631..56227651,- | |description=CAGE_peak_at_chr20:56227631..56227651,- | ||
|id=chr20:56227631..56227651,- | |id=chr20:56227631..56227651,- | ||
|ontology_enrichment_celltype=CL:0002076!7.28e-08!43 | |ontology_enrichment_celltype=CL:0002076!7.28e-08!43 | ||
|ontology_enrichment_celltype_v019=CL:0002231;2.46e-13;3!CL:0002368;2.54e-11;13!CL:0002581;2.28e-10;1!CL:0000244;2.39e-10;4!CL:0000731;2.39e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,3.16e-13,3;CL:0002368,1.88e-11,13;CL:0002581,1.57e-10,1;CL:0000244,2.39e-10,4;CL:0000731,2.39e-10,4;CL:0002076,2.16e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.28e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004913;7.75e-11;1!UBERON:0003703;7.75e-11;1!UBERON:0001174;7.75e-11;1!UBERON:0004914;7.75e-11;1!UBERON:0000941;2.28e-10;1!UBERON:0001785;2.28e-10;1!UBERON:0002464;2.28e-10;1!UBERON:0004904;2.28e-10;1!UBERON:0001021;2.28e-10;1!UBERON:0002394;3.37e-10;4!UBERON:0003928;3.37e-10;4!UBERON:0000058;8.15e-09;10!UBERON:0000365;1.89e-08;5!UBERON:0005910;3.54e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,7.40e-11,1;UBERON:0003703,7.40e-11,1;UBERON:0001174,7.40e-11,1;UBERON:0004914,7.40e-11,1;UBERON:0000941,2.08e-10,1;UBERON:0001785,2.08e-10,1;UBERON:0002464,2.08e-10,1;UBERON:0004904,2.08e-10,1;UBERON:0001021,2.08e-10,1;UBERON:0003902,2.08e-10,1;UBERON:0005425,2.08e-10,1;UBERON:0000365,1.89e-08,5;UBERON:0005910,3.55e-07,6;UBERON:0002394,4.13e-07,6;UBERON:0003928,4.13e-07,6 | |||
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| ||
|short_description=p@chr20:56227631..56227651,- | |short_description=p@chr20:56227631..56227651,- | ||
}} | }} |
Latest revision as of 15:43, 28 July 2015
Short description: | p@chr20:56227631..56227651, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:56227631..56227651, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 3.16e-13 | 3 |
respiratory epithelial cell | 1.88e-11 | 13 |
perirenal preadipocyte | 1.57e-10 | 1 |
transitional epithelial cell | 2.39e-10 | 4 |
urothelial cell | 2.39e-10 | 4 |
endo-epithelial cell | 2.16e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 7.40e-11 | 1 |
extrahepatic bile duct | 7.40e-11 | 1 |
common bile duct | 7.40e-11 | 1 |
duodenal papilla | 7.40e-11 | 1 |
cranial nerve II | 2.08e-10 | 1 |
cranial nerve | 2.08e-10 | 1 |
nerve trunk | 2.08e-10 | 1 |
nerve connecting eye with brain | 2.08e-10 | 1 |
nerve | 2.08e-10 | 1 |
retinal neural layer | 2.08e-10 | 1 |
presumptive neural retina | 2.08e-10 | 1 |
urothelium | 1.89e-08 | 5 |
transitional epithelium | 3.55e-07 | 6 |
bile duct | 4.13e-07 | 6 |
digestive system duct | 4.13e-07 | 6 |