FFCP PHASE1:Hg19::chr20:9172019..9172022,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:9172019..9172022,+
|short_description=p@chr20:9172019..9172022,+
|description=CAGE_peak_at_chr20:9172019..9172022,+
|association_with_transcript=NA
|Entr...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:9172019..9172022,+ | |||
|coexpression_cluster_id=C1071 | |||
|description=CAGE_peak_at_chr20:9172019..9172022,+ | |||
|id=chr20:9172019..9172022,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000313;2.77e-12;1!CL:0000159;9.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,2.63e-12,1;CL:0000159,8.93e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.01e-15;3!UBERON:0006298;8.62e-12;1!UBERON:0010227;8.62e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;2.77e-12;1!DOID:3112;8.62e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.63e-12,1;DOID:3112,6.26e-12,1;DOID:4468,9.96e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.36e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002081;8.24e-22;2!UBERON:0004151;7.01e-15;3!UBERON:0004911;2.77e-12;1!UBERON:0007029;8.62e-12;1!UBERON:0002079;8.62e-12;1!UBERON:0001736;8.62e-12;1!UBERON:0002134;8.62e-12;1!UBERON:0007195;8.62e-12;1!UBERON:0005208;8.62e-12;1!UBERON:0004145;8.62e-12;1!UBERON:0005946;8.62e-12;1!UBERON:0005965;8.62e-12;1!UBERON:0002078;8.62e-12;1!UBERON:0002037;6.83e-08;6!UBERON:0001044;6.83e-08;6!UBERON:0003293;6.83e-08;6!UBERON:0003294;6.83e-08;6!UBERON:0010047;6.83e-08;6!UBERON:0003408;6.83e-08;6!UBERON:0000167;6.83e-08;6!UBERON:0004909;9.17e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002081,1.40e-21,2;UBERON:0010227,1.40e-21,2;UBERON:0004151,9.97e-15,3;UBERON:0004911,2.63e-12,1;UBERON:0007029,9.61e-12,1;UBERON:0002134,1.07e-11,1;UBERON:0005208,1.07e-11,1;UBERON:0005946,1.07e-11,1;UBERON:0005965,1.07e-11,1;UBERON:0002078,1.07e-11,1;UBERON:0002079,1.19e-11,1;UBERON:0001736,1.32e-11,1;UBERON:0006298,1.32e-11,1;UBERON:0007195,1.63e-11,1;UBERON:0001044,6.60e-08,6;UBERON:0003293,6.60e-08,6;UBERON:0003294,6.60e-08,6;UBERON:0010047,6.60e-08,6;UBERON:0000167,6.60e-08,6;UBERON:0002037,8.13e-08,6;UBERON:0006215,8.13e-08,6;UBERON:0004909,8.93e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.702678285545008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0.561803226808994,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0,0.438977620880838,0.30648779579902,0,0,0.89694817844431,0,0,0.300091096084402,0,0.257640540045629,0,0.506328996723799,0,0.252433774244115,0,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0.623912584592421,0.356857977594324,1.73472656537328,0.702848489956279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0,0.457847324091717,1.73269949833235,0,0,0,0,0,0,0.275673144969061,0.107420244868274,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0.293016358543788,0,0,1.70481688083848,0,0,0,0,0,0.556543525114529,0,0,0.597743964753209,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0.0927680981618513,0,0,0.437299999980979,0,0,0,0,0,0.291604613383254,0.347249989866585,0,0,1.52581736317083,1.21637185924347,0.591095237907095,0,0.21787692703798,0.139423744278603,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,2.3209787098083,0.816164040795739,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,0,0,0.189559738885464,0.300646838828985,0.207376382794494,0,0,0,0,0.284609546029793,0,0,0,0,0.873633341210151,0.51595809741485,0,0,0,0,0,0.451961481561065,0.685209623233754,0.397429223405979,0,0,0.320635281006135,0,0,0,0.458146384663663,0,0,0,0,0,0.104602846312333,0.305994652908965,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,1.43574604915363,0,0,0.223171457441873,0.604651252380536,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0.179287339332845,0.383830394638891,1.42939065274673,0,0,0,0,0,0,0,0.681552087141687,0.113312091520126,0,0,0.129282956361551,0.39669780522807,0,0,0,0.628817220398664,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.443716206147409,0.0620964029413835,0,0,0.909894705249887,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,1.60011105865261,0,0,0,0,0,0,0,0,0.244736704506468,1.07453304648892,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0.737318726261158,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0.323474434190045,0,0.655257829152084,0,0.212574920101683,0,0.558644917973244,0.318004350653419,0,0,0,0.3062454773532,0.128458450192919,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0.397832444232549,0,2.0170506870352,0,0,1.63771917510097,0.147856086217045,0.202612753855184,0,0,0,0.546974809018219,0,0.992422356778588,0,0.127762427639595,0,0,0,0.455324382702595,0,0,0,0.339848664884159,0,0,0.111231401892069,0,0,0,0,3.23891386827932,0.47775168788705,0.714765441766563,0,0,0,0,0,0,0,1.72090943528111,0,0,0,0,0,0,3.80308468112494,0,0,0,0,0,1.45713297917742,0,0.994753875806841,0.237840181555137,0,0,0,0,0,0,0.245148321753905,0.235676547101626,0.196308467114945,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,1.37618785021362,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0.109265571963696,0.380095503034311,0.101988829741982,0,0.0918948995348449,0,0.303114792872958,0,0,0.20686599172379,0.426467963801962,0.952257725854961,0,0,0.784923038064294,0.0636471582781649,0.606351566874658,0,0,0.134704106029175,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.366724332548599,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.702678285545008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0.561803226808994,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0,0.438977620880838,0.30648779579902,0,0,0.89694817844431,0,0,0.300091096084402,0,0.257640540045629,0,0.506328996723799,0,0.252433774244115,0,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0.623912584592421,0.356857977594324,1.73472656537328,0.702848489956279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0,0.457847324091717,1.73269949833235,0,0,0,0,0,0,0.275673144969061,0.107420244868274,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0.293016358543788,0,0,1.70481688083848,0,0,0,0,0,0.556543525114529,0,0,0.597743964753209,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0.0927680981618513,0,0,0.437299999980979,0,0,0,0,0,0.291604613383254,0.347249989866585,0,0,1.52581736317083,1.21637185924347,0.591095237907095,0,0.21787692703798,0.139423744278603,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,2.3209787098083,0.816164040795739,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,0,0,0.189559738885464,0.300646838828985,0.207376382794494,0,0,0,0,0.284609546029793,0,0,0,0,0.873633341210151,0.51595809741485,0,0,0,0,0,0.451961481561065,0.685209623233754,0.397429223405979,0,0,0.320635281006135,0,0,0,0.458146384663663,0,0,0,0,0,0.104602846312333,0.305994652908965,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,1.43574604915363,0,0,0.223171457441873,0.604651252380536,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0.179287339332845,0.383830394638891,1.42939065274673,0,0,0,0,0,0,0,0.681552087141687,0.113312091520126,0,0,0.129282956361551,0.39669780522807,0,0,0,0.628817220398664,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.443716206147409,0.0620964029413835,0,0,0.909894705249887,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,1.60011105865261,0,0,0,0,0,0,0,0,0.244736704506468,1.07453304648892,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0.737318726261158,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0.323474434190045,0,0.655257829152084,0,0.212574920101683,0,0.558644917973244,0.318004350653419,0,0,0,0.3062454773532,0.128458450192919,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0.397832444232549,0,2.0170506870352,0,0,1.63771917510097,0.147856086217045,0.202612753855184,0,0,0,0.546974809018219,0,0.992422356778588,0,0.127762427639595,0,0,0,0.455324382702595,0,0,0,0.339848664884159,0,0,0.111231401892069,0,0,0,0,3.23891386827932,0.47775168788705,0.714765441766563,0,0,0,0,0,0,0,1.72090943528111,0,0,0,0,0,0,3.80308468112494,0,0,0,0,0,1.45713297917742,0,0.994753875806841,0.237840181555137,0,0,0,0,0,0,0.245148321753905,0.235676547101626,0.196308467114945,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,1.37618785021362,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0.109265571963696,0.380095503034311,0.101988829741982,0,0.0918948995348449,0,0.303114792872958,0,0,0.20686599172379,0.426467963801962,0.952257725854961,0,0,0.784923038064294,0.0636471582781649,0.606351566874658,0,0,0.134704106029175,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.366724332548599,0,0,0,0 | ||
|short_description=p@chr20:9172019..9172022,+ | |||
}} | }} |
Latest revision as of 16:38, 28 July 2015
Short description: | p@chr20:9172019..9172022, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:9172019..9172022, + |
Coexpression cluster: | C1071_renal_serous_Olfactory_clear_mesothelioma_Fibroblast_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 2.63e-12 | 1 |
seromucus secreting cell | 8.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cardiac atrium | 1.40e-21 | 2 |
future cardiac atrium | 1.40e-21 | 2 |
cardiac chamber | 9.97e-15 | 3 |
epithelium of female gonad | 2.63e-12 | 1 |
surface | 9.61e-12 | 1 |
tricuspid valve | 1.07e-11 | 1 |
right atrium valve | 1.07e-11 | 1 |
outflow tract of atrium | 1.07e-11 | 1 |
outflow part of right atrium | 1.07e-11 | 1 |
right cardiac atrium | 1.07e-11 | 1 |
left cardiac atrium | 1.19e-11 | 1 |
submandibular gland | 1.32e-11 | 1 |
submandibular gland primordium | 1.32e-11 | 1 |
stroma of bone marrow | 1.63e-11 | 1 |
saliva-secreting gland | 6.60e-08 | 6 |
gland of oral region | 6.60e-08 | 6 |
gland of foregut | 6.60e-08 | 6 |
oral gland | 6.60e-08 | 6 |
oral cavity | 6.60e-08 | 6 |
cerebellum | 8.13e-08 | 6 |
rhombic lip | 8.13e-08 | 6 |
epithelium of gonad | 8.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.63e-12 | 1 |
papillary adenocarcinoma | 6.26e-12 | 1 |
clear cell adenocarcinoma | 9.96e-07 | 2 |