FFCP PHASE1:Hg19::chr21:40277730..40277733,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:40277730..40277733,+ | |||
|coexpression_cluster_id=C122 | |||
|description=CAGE_peak_at_chr21:40277730..40277733,+ | |description=CAGE_peak_at_chr21:40277730..40277733,+ | ||
|id=chr21:40277730..40277733,+ | |id=chr21:40277730..40277733,+ | ||
|ontology_enrichment_celltype=CL:0002368!8.98e-07!13 | |ontology_enrichment_celltype=CL:0002368!8.98e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000307;3.11e-27;3!CL:0002368;2.43e-14;13!CL:0002202;9.23e-10;9!CL:0002632;9.23e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.56e-27,3;CL:0000069,3.56e-27,3;CL:0000307,3.56e-27,3;CL:0000377,3.56e-27,3;CL:0002368,2.73e-14,13;CL:0002202,9.65e-10,9;CL:0002632,9.65e-10,9 | |||
|ontology_enrichment_development_v019=CL:0000377;3.11e-27;3 | |||
|ontology_enrichment_disease=DOID:162!1.49e-14!235;DOID:1749!4.33e-14!14;DOID:14566!5.51e-14!239;DOID:0050687!2.48e-10!143;DOID:1036!1.81e-08!8;DOID:305!3.28e-08!106 | |ontology_enrichment_disease=DOID:162!1.49e-14!235;DOID:1749!4.33e-14!14;DOID:14566!5.51e-14!239;DOID:0050687!2.48e-10!143;DOID:1036!1.81e-08!8;DOID:305!3.28e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.30e-13;14!DOID:1036;5.55e-11;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.98e-13,14;DOID:1036,6.61e-11,8 | |||
|ontology_enrichment_uberon=UBERON:0000344!6.05e-07!12 | |ontology_enrichment_uberon=UBERON:0000344!6.05e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0003126;2.81e-12;7!UBERON:0001005;2.81e-12;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.98e-12,7;UBERON:0001005,2.98e-12,7 | |||
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| ||
|short_description=p@chr21:40277730..40277733,+ | |short_description=p@chr21:40277730..40277733,+ | ||
}} | }} |
Latest revision as of 17:55, 28 July 2015
Short description: | p@chr21:40277730..40277733, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:40277730..40277733, + |
Coexpression cluster: | C122_chronic_Reticulocytes_skeletal_leukemia_acute_colon_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.56e-27 | 3 |
branched duct epithelial cell | 3.56e-27 | 3 |
tracheal epithelial cell | 3.56e-27 | 3 |
tracheoblast | 3.56e-27 | 3 |
respiratory epithelial cell | 2.73e-14 | 13 |
epithelial cell of tracheobronchial tree | 9.65e-10 | 9 |
epithelial cell of lower respiratory tract | 9.65e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.98e-12 | 7 |
respiratory airway | 2.98e-12 | 7 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.98e-13 | 14 |
chronic leukemia | 6.61e-11 | 8 |