FFCP PHASE1:Hg19::chr22:33258451..33258463,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr22:33258451..33258463,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr22:33258451..33258463,+ | |||
|id=chr22:33258451..33258463,+ | |||
|ontology_enrichment_celltype=CL:0002334!5.06e-11!12;CL:0000057!1.02e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002541;4.48e-21;3!CL:0000349;8.59e-09;19!CL:0002379;4.35e-08;1!CL:0002581;1.18e-07;1!CL:0000134;5.64e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.97e-21,3;CL:0000349,8.67e-09,19;CL:0002379,4.07e-08,1;CL:0002581,1.11e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.18e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;3.31e-08;1!DOID:3620;4.35e-08;1!DOID:3565;4.35e-08;1!DOID:3369;4.35e-08;1!DOID:4235;1.18e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,3.55e-08,1;DOID:3620,4.07e-08,1;DOID:3565,4.07e-08,1;DOID:3369,4.35e-08,1;DOID:4235,9.72e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.29e-08!14;UBERON:0000158!2.29e-08!14;UBERON:0004923!7.80e-08!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.48e-21;3!UBERON:0000920;4.48e-21;3!UBERON:0005631;6.40e-17;10!UBERON:0000158;6.40e-17;10!UBERON:0000478;1.39e-09;24!UBERON:0002135;1.18e-07;1!UBERON:0001301;1.18e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.97e-21,3;UBERON:0005631,9.27e-17,14;UBERON:0000158,9.27e-17,14;UBERON:0003124,2.10e-15,7;UBERON:0004923,5.52e-10,66;UBERON:0000478,1.52e-09,24;UBERON:0002135,7.45e-08,1;UBERON:0001301,1.75e-07,1 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0.893922188854576,0.872338524100369,0,0,0,0.491467873003018,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.434539556882471,0,0.486634870302636,0,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,0.760272105718513,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,0.759783069987479,0.132409180813219,1.14734648299525,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0.61246251376468,0.122834317311768,0,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0,0,0.538168907066586,0,0.211931901159562,1.50045548042201,0,0.772921620136887,0.18611685633159,0.843881661206331,0.194874010322397,0,0,0.323292113637624,1.42003837006646,0.201504196455281,0.508681776931463,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0.381988425558278,0,0,0.308482478109971,0.901029173531752,0.285826432630578,0,0,0.22001485746285,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.315404830067869,0.117141414992713,0.601892199455438,0,1.03473071292505,0.664225598535437,0.184369168541703,0.347534457872331,0,0,0,0,0,0.606255142892519,0,0.30239029332968,0.496215615637554,0.460385919864187,1.40330047216537,0.128139149255701,1.53512174720011,0.64341568457443,1.48418066444991,0.462629081407967,0.532685175939381,0.164254312027618,0.519254429183621,0.581051892299796,0.120859449591622,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.976135183992909,0.412164046590889,0,0,0,0.650060246036521,0,0,0.308097234229289,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,3.77774816196768,0,0,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0,0,0,0,0,0,0.404364963146632,0,0.421258456238981,0,0.243713489631284,3.16950440270266,0,0.424216295861138,0,0,0,0.876901770507525,0,0,0,0,0,0,0.196498082026242,0,0,0.844430541190656,1.97576935775941,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.879049075631364,0,0,0,4.7748896947538,0.593929361665277,4.60741053148848,0,0,0,0,0,0.398495976502139,0,0,0,0,4.3545542272653,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0.227884111694002,0,0,0,8.93203247249374,2.01514705484097,39.9776082013976,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0.305994652908965,0.288950589901519,0,0,0,0,0,1.95497680890578,0.687481272035051,0,0.199679000498991,2.14613024068285,0.223171457441873,0.134366944973453,0,0,0.157566364614447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.157363764404994,0,0,0,0,0.662091970365432,0,0.542999601753713,0.864221491201268,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.747511887973863,0,0,0.496166021811951,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,3.76425311517075,0,0,0.895528817321244,0.233713309847224,0.554805861502613,0.568209015825267,0.50313580350515,0.889811221596536,0.457680136793847,0.604923695052956,0.15543720058278,0,0,0,0.155262956876259,0,3.19010057469594,1.5652351854352,0.751288044986092,0.761610424337591,2.84809513243263,0.181848659202559,0.107410557042488,0,0.398095888698616,0,1.71697852591396,0,0,0,0,0,0,0.231522474323834,0,0,0.308801447160972,0,0.530067437837643,0.192914038270915,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0,0,0,0,0.205116364240755,0.504143392443436,0,0.161475645631851,0,0.0981477185010256,0,0,0.115525666150338,0,0,0.198916222116275,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0.336283722218824,0,0,1.06442844195167,0,0,0.135939465953663,0,0,0,0.39246546425257,0.157115589916002,0,0.913158720509496,0,0,1.00067161847319,0,0,0,0,0,0.17071847709395,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0.196308467114945,0,0.4226557275834,1.52934403219035,0.0939839179798536,0,0,0.178553938605658,0,0,0.730336388246517,0.458729283404541,0.143339583151451,0,0,0,0.5290268405154,0.371995018166751,0.924351257262837,2.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| |||
|short_description=p@chr22:33258451..33258463,+ | |||
}} |
Latest revision as of 20:30, 28 July 2015
Short description: | p@chr22:33258451..33258463, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:33258451..33258463, + |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.97e-21 | 3 |
extraembryonic cell | 8.67e-09 | 19 |
meningothelial cell | 4.07e-08 | 1 |
perirenal preadipocyte | 1.11e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.97e-21 | 3 |
extraembryonic membrane | 9.27e-17 | 14 |
membranous layer | 9.27e-17 | 14 |
chorion | 2.10e-15 | 7 |
organ component layer | 5.52e-10 | 66 |
extraembryonic structure | 1.52e-09 | 24 |
mitral valve | 7.45e-08 | 1 |
epididymis | 1.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 3.55e-08 | 1 |
central nervous system cancer | 4.07e-08 | 1 |
meningioma | 4.07e-08 | 1 |
peripheral primitive neuroectodermal tumor | 4.35e-08 | 1 |
spindle cell sarcoma | 9.72e-08 | 1 |