FFCP PHASE1:Hg19::chr22:38493783..38493794,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr22:38493783..38493794,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr22:38493783..38493794,- | |||
|id=chr22:38493783..38493794,- | |||
|ontology_enrichment_celltype=CL:0002322!6.73e-19!5;CL:0000039!8.60e-18!7;CL:0000586!8.60e-18!7;CL:0000064!6.09e-11!3;CL:0005012!6.09e-11!3;CL:0000067!6.09e-11!3;CL:0002304!6.09e-11!3;CL:0000075!5.78e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002322;5.39e-77;5!CL:0002321;7.71e-26;15!CL:0000148;1.22e-14;10!CL:0000540;4.16e-11;6!CL:0000404;4.16e-11;6!CL:0000147;1.25e-10;14!CL:0000039;1.47e-09;7!CL:0000586;1.47e-09;7!CL:0002535;5.08e-09;2!CL:0000710;1.32e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.95e-77,5;CL:0000148,1.12e-14,10;CL:0000541,1.12e-14,10;CL:0000540,4.37e-11,6;CL:0000031,4.37e-11,6;CL:0000404,4.37e-11,6;CL:0000147,1.17e-10,14;CL:0000039,1.41e-09,7;CL:0000586,1.41e-09,7;CL:0002535,5.94e-09,2;CL:0000047,1.53e-08,8;CL:0000710,1.27e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000031;4.16e-11;6!UBERON:0009117;5.94e-07;10!UBERON:0005564;5.94e-07;10 | |||
|ontology_enrichment_disease=DOID:3095!4.07e-14!22;DOID:2994!4.07e-14!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.53e-17;22!DOID:2994;3.53e-17;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.41e-17,22;DOID:2994,3.41e-17,22 | |||
|ontology_enrichment_uberon=UBERON:0001778!6.09e-11!3;UBERON:0001775!6.09e-11!3;UBERON:0002203!2.49e-09!6;UBERON:0001768!2.49e-09!6;UBERON:0000488!2.63e-08!4;UBERON:0007625!2.10e-07!11;UBERON:0000473!2.95e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;5.08e-09;2!UBERON:0004801;5.08e-09;2!UBERON:0000922;5.75e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,5.94e-09,2;UBERON:0004801,5.94e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0.665188192387692,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65921118388786,2.25300606146525,2.67246068599892,4.25010325563019,6.81266297364197,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,2.01546198283421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0,0,0,0.359030577639089,1.3037684630641,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450970258243478,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44677833618517,2.06309154895851,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415045904808692,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.198950775161368,0,0.11294608203896,0.219881033490858,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7663299476911,1.09265571963696,2.53397002022874,0.713921808193872,1.87052183685892,0.36757959813938,0.50141507858475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr22:38493783..38493794,- | |||
}} |
Latest revision as of 21:08, 28 July 2015
Short description: | p@chr22:38493783..38493794, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:38493783..38493794, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.95e-77 | 5 |
melanocyte | 1.12e-14 | 10 |
melanoblast | 1.12e-14 | 10 |
neuron | 4.37e-11 | 6 |
neuroblast | 4.37e-11 | 6 |
electrically signaling cell | 4.37e-11 | 6 |
pigment cell | 1.17e-10 | 14 |
germ line cell | 1.41e-09 | 7 |
germ cell | 1.41e-09 | 7 |
epithelial cell of cervix | 5.94e-09 | 2 |
neuronal stem cell | 1.53e-08 | 8 |
neurecto-epithelial cell | 1.27e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 5.94e-09 | 2 |
cervix epithelium | 5.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.41e-17 | 22 |
germ cell cancer | 3.41e-17 | 22 |