FFCP PHASE1:Hg19::chr2:134399236..134399260,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:134399236..134399260,- | |||
|description=CAGE_peak_at_chr2:134399236..134399260,- | |description=CAGE_peak_at_chr2:134399236..134399260,- | ||
|id=chr2:134399236..134399260,- | |id=chr2:134399236..134399260,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.93e-16;1 | |ontology_enrichment_development_v019=UBERON:0005425;1.93e-16;1 | ||
|ontology_enrichment_disease=DOID:1192!2.17e-07!3 | |ontology_enrichment_disease=DOID:1192!2.17e-07!3 | ||
|ontology_enrichment_disease_v019=DOID:1192;2.53e-21;3!DOID:3369;8.19e-17;1!DOID:3193;6.93e-09;2!DOID:962;6.93e-09;2 | |ontology_enrichment_disease_v019=DOID:1192;2.53e-21;3!DOID:3369;8.19e-17;1!DOID:3193;6.93e-09;2!DOID:962;6.93e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1192,1.76e-21,3;DOID:3369,7.57e-17,1;DOID:3193,5.49e-09,2;DOID:962,5.49e-09,2 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.65e-16,1;UBERON:0001785,1.65e-16,1;UBERON:0002464,1.65e-16,1;UBERON:0004904,1.65e-16,1;UBERON:0001021,1.65e-16,1;UBERON:0003902,1.65e-16,1;UBERON:0005425,1.65e-16,1;UBERON:0003714,6.42e-09,2;UBERON:0005162,6.42e-09,2;UBERON:0000122,6.42e-09,2;UBERON:0000010,1.02e-07,8 | |||
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| ||
|short_description=p@chr2:134399236..134399260,- | |short_description=p@chr2:134399236..134399260,- | ||
}} | }} |
Latest revision as of 00:28, 29 July 2015
Short description: | p@chr2:134399236..134399260, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:134399236..134399260, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.65e-16 | 1 |
cranial nerve | 1.65e-16 | 1 |
nerve trunk | 1.65e-16 | 1 |
nerve connecting eye with brain | 1.65e-16 | 1 |
nerve | 1.65e-16 | 1 |
retinal neural layer | 1.65e-16 | 1 |
presumptive neural retina | 1.65e-16 | 1 |
neural tissue | 6.42e-09 | 2 |
multi cell component structure | 6.42e-09 | 2 |
neuron projection bundle | 6.42e-09 | 2 |
peripheral nervous system | 1.02e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 1.76e-21 | 3 |
peripheral primitive neuroectodermal tumor | 7.57e-17 | 1 |
peripheral nerve sheath neoplasm | 5.49e-09 | 2 |
neurofibroma | 5.49e-09 | 2 |