FFCP PHASE1:Hg19::chr2:138722224..138722240,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:138722224..138722240,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr2:138722224..138722240,+ | |||
|id=chr2:138722224..138722240,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.49e-30!42;CL:0000860!6.21e-28!45;CL:0002009!9.50e-23!65;CL:0002194!5.72e-22!63;CL:0000576!5.72e-22!63;CL:0000040!5.72e-22!63;CL:0000559!5.72e-22!63;CL:0000557!4.70e-20!71;CL:0000839!6.81e-19!70;CL:0000766!1.02e-16!76;CL:0000763!2.34e-10!112;CL:0000049!2.34e-10!112;CL:0002087!3.28e-09!119;CL:0002031!1.41e-08!124;CL:0000738!2.64e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.12e-45;33!CL:0002057;2.12e-45;33!CL:0000473;1.43e-33;39!CL:0000234;1.43e-33;39!CL:0000576;3.39e-22;48!CL:0000766;3.26e-10;69!CL:0000182;4.15e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.71e-38,42;CL:0002057,2.71e-38,42;CL:0000473,2.83e-33,48;CL:0000234,2.83e-33,48;CL:0002194,3.06e-26,59;CL:0000576,3.06e-26,59;CL:0000040,3.06e-26,59;CL:0000559,3.06e-26,59;CL:0002009,2.48e-25,61;CL:0000839,2.68e-23,66;CL:0000557,6.30e-23,67;CL:0000766,3.18e-21,72;CL:0000763,1.48e-13,108;CL:0000049,1.48e-13,108;CL:0002087,1.29e-12,115;CL:0002031,5.19e-12,120;CL:0000738,2.27e-10,136;CL:0002032,1.89e-08,161;CL:0000837,1.89e-08,161;CL:0000182,4.05e-08,12;CL:0000037,5.14e-08,168;CL:0000988,1.67e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.16e-27;42!UBERON:0004161;8.42e-09;11!UBERON:0009497;1.60e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.44e-20!115;UBERON:0002371!3.40e-18!80;UBERON:0001474!1.74e-17!86;UBERON:0002390!2.37e-15!102;UBERON:0003061!2.37e-15!102;UBERON:0004765!1.44e-14!101;UBERON:0001434!1.44e-14!101;UBERON:0002193!4.80e-14!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.80e-07;6!UBERON:0002358;1.80e-07;6!UBERON:0003684;1.80e-07;6!UBERON:0001178;1.80e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.09e-20,76;UBERON:0001474,1.98e-18,82;UBERON:0004765,1.23e-16,90;UBERON:0002405,4.85e-16,93;UBERON:0002390,3.95e-15,98;UBERON:0003061,3.95e-15,98;UBERON:0001434,8.63e-15,100;UBERON:0002193,1.48e-13,108;UBERON:0002204,4.48e-08,167;UBERON:0003688,2.41e-07,6;UBERON:0002358,2.41e-07,6;UBERON:0003684,2.41e-07,6;UBERON:0001178,2.41e-07,6 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.140954404095971,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0.257575567634187,0.145398238779565,0,2.18325655069035,0.697287110717054,0,1.85823822537062,1.43846196161075,1.2808035326455,1.6553756092201,2.75796544589295,0.645484683583826,4.06279459783025,0.376484679085209,0.272906150057846,1.57306439111559,0.306083892370903,0.962787081228281,3.19668562899521,0,0.398927315243264,0.426224750532694,0.580418477257168,0,1.24564449799115,2.76373531782418,1.5644487552606,3.04064382587163,0,0.736555271975129,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.891786973732369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0.248107807818777,0.61384789315225,0.280660094433074,0,1.02341449813341,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608731130888112,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,2.52106183383116,1.64831716762333,2.02210631562555,0,0,0,0.136203406111576,0,0,0,0.674921674654501,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.26446520348538,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887432412294818,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.754703705257725,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.342976018874837,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,2.15113679410139,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.386747327841463,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0,0,0.517164979309476,0.213233981900981,0,0,0,0,0.0636471582781649,0,0,0,0.134704106029175,0.215166616178029,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr2:138722224..138722240,+ | |||
}} |
Latest revision as of 00:41, 29 July 2015
Short description: | p@chr2:138722224..138722240, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:138722224..138722240, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.71e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.71e-38 | 42 |
defensive cell | 2.83e-33 | 48 |
phagocyte | 2.83e-33 | 48 |
monopoietic cell | 3.06e-26 | 59 |
monocyte | 3.06e-26 | 59 |
monoblast | 3.06e-26 | 59 |
promonocyte | 3.06e-26 | 59 |
macrophage dendritic cell progenitor | 2.48e-25 | 61 |
myeloid lineage restricted progenitor cell | 2.68e-23 | 66 |
granulocyte monocyte progenitor cell | 6.30e-23 | 67 |
myeloid leukocyte | 3.18e-21 | 72 |
myeloid cell | 1.48e-13 | 108 |
common myeloid progenitor | 1.48e-13 | 108 |
nongranular leukocyte | 1.29e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 5.19e-12 | 120 |
leukocyte | 2.27e-10 | 136 |
hematopoietic oligopotent progenitor cell | 1.89e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.89e-08 | 161 |
hepatocyte | 4.05e-08 | 12 |
hematopoietic stem cell | 5.14e-08 | 168 |
hematopoietic cell | 1.67e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.09e-20 | 76 |
bone element | 1.98e-18 | 82 |
skeletal element | 1.23e-16 | 90 |
immune system | 4.85e-16 | 93 |
hematopoietic system | 3.95e-15 | 98 |
blood island | 3.95e-15 | 98 |
skeletal system | 8.63e-15 | 100 |
hemolymphoid system | 1.48e-13 | 108 |
musculoskeletal system | 4.48e-08 | 167 |
omentum | 2.41e-07 | 6 |
peritoneum | 2.41e-07 | 6 |
abdominal cavity | 2.41e-07 | 6 |
visceral peritoneum | 2.41e-07 | 6 |