FFCP PHASE1:Hg19::chr2:149633261..149633270,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=74bp_to_AB384491_5end | |association_with_transcript=74bp_to_AB384491_5end | ||
|cluster_id=chr2:149633261..149633270,+ | |||
|coexpression_cluster_id=C552 | |coexpression_cluster_id=C552 | ||
|description=CAGE_peak_1_at_AB384491_5end | |description=CAGE_peak_1_at_AB384491_5end | ||
|id=chr2:149633261..149633270,+ | |id=chr2:149633261..149633270,+ | ||
|ontology_enrichment_celltype=CL:0002319!3.20e-07!25 | |ontology_enrichment_celltype=CL:0002319!3.20e-07!25 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.38e-65!57;UBERON:0005068!1.38e-65!57;UBERON:0006241!1.38e-65!57;UBERON:0007135!1.38e-65!57;UBERON:0001017!2.63e-64!82;UBERON:0005743!6.10e-61!86;UBERON:0002020!3.02e-60!34;UBERON:0003528!3.02e-60!34;UBERON:0001893!3.53e-60!34;UBERON:0001869!6.16e-59!32;UBERON:0002780!8.35e-58!41;UBERON:0001890!8.35e-58!41;UBERON:0006240!8.35e-58!41;UBERON:0002791!4.87e-57!33;UBERON:0003080!2.70e-56!42;UBERON:0002616!4.07e-55!59;UBERON:0000955!8.33e-55!69;UBERON:0006238!8.33e-55!69;UBERON:0000073!2.20e-54!94;UBERON:0001016!2.20e-54!94;UBERON:0000956!1.98e-47!25;UBERON:0000203!1.98e-47!25;UBERON:0003075!1.37e-43!86;UBERON:0007284!1.37e-43!86;UBERON:0002619!1.52e-43!22;UBERON:0002346!2.73e-41!90;UBERON:0001950!4.56e-37!20;UBERON:0003056!7.09e-37!61;UBERON:0000033!2.43e-29!123;UBERON:0004121!3.94e-28!169;UBERON:0000153!1.36e-27!129;UBERON:0007811!1.36e-27!129;UBERON:0000924!2.88e-27!173;UBERON:0006601!2.88e-27!173;UBERON:0007023!1.11e-26!115;UBERON:0000200!1.35e-22!6;UBERON:0000025!5.28e-17!194;UBERON:0001871!7.75e-17!7;UBERON:0002420!3.77e-14!9;UBERON:0007245!3.77e-14!9;UBERON:0010009!3.77e-14!9;UBERON:0010011!3.77e-14!9;UBERON:0000454!3.77e-14!9;UBERON:0002308!4.55e-14!9;UBERON:0000125!4.55e-14!9;UBERON:0009663!8.81e-13!7;UBERON:0002771!1.51e-12!3;UBERON:0000349!3.92e-12!5;UBERON:0004111!5.32e-12!241;UBERON:0003076!5.39e-11!15;UBERON:0003057!5.39e-11!15;UBERON:0002298!7.77e-11!8;UBERON:0000477!2.46e-10!286;UBERON:0000483!1.16e-09!309;UBERON:0000119!1.76e-09!312;UBERON:0000064!2.68e-09!219;UBERON:0000369!9.58e-09!4;UBERON:0002435!9.58e-09!4;UBERON:0000204!9.58e-09!4;UBERON:0010082!9.58e-09!4;UBERON:0001954!1.11e-08!2;UBERON:0003022!1.11e-08!2;UBERON:0002421!1.11e-08!2;UBERON:0002600!1.11e-08!2;UBERON:0001870!1.94e-08!2;UBERON:0000475!4.94e-08!365;UBERON:0002021!9.36e-08!5;UBERON:0001872!3.06e-07!5;UBERON:0004733!3.46e-07!12;UBERON:0002028!3.46e-07!12;UBERON:0007277!3.46e-07!12 | |ontology_enrichment_uberon=UBERON:0001049!1.38e-65!57;UBERON:0005068!1.38e-65!57;UBERON:0006241!1.38e-65!57;UBERON:0007135!1.38e-65!57;UBERON:0001017!2.63e-64!82;UBERON:0005743!6.10e-61!86;UBERON:0002020!3.02e-60!34;UBERON:0003528!3.02e-60!34;UBERON:0001893!3.53e-60!34;UBERON:0001869!6.16e-59!32;UBERON:0002780!8.35e-58!41;UBERON:0001890!8.35e-58!41;UBERON:0006240!8.35e-58!41;UBERON:0002791!4.87e-57!33;UBERON:0003080!2.70e-56!42;UBERON:0002616!4.07e-55!59;UBERON:0000955!8.33e-55!69;UBERON:0006238!8.33e-55!69;UBERON:0000073!2.20e-54!94;UBERON:0001016!2.20e-54!94;UBERON:0000956!1.98e-47!25;UBERON:0000203!1.98e-47!25;UBERON:0003075!1.37e-43!86;UBERON:0007284!1.37e-43!86;UBERON:0002619!1.52e-43!22;UBERON:0002346!2.73e-41!90;UBERON:0001950!4.56e-37!20;UBERON:0003056!7.09e-37!61;UBERON:0000033!2.43e-29!123;UBERON:0004121!3.94e-28!169;UBERON:0000153!1.36e-27!129;UBERON:0007811!1.36e-27!129;UBERON:0000924!2.88e-27!173;UBERON:0006601!2.88e-27!173;UBERON:0007023!1.11e-26!115;UBERON:0000200!1.35e-22!6;UBERON:0000025!5.28e-17!194;UBERON:0001871!7.75e-17!7;UBERON:0002420!3.77e-14!9;UBERON:0007245!3.77e-14!9;UBERON:0010009!3.77e-14!9;UBERON:0010011!3.77e-14!9;UBERON:0000454!3.77e-14!9;UBERON:0002308!4.55e-14!9;UBERON:0000125!4.55e-14!9;UBERON:0009663!8.81e-13!7;UBERON:0002771!1.51e-12!3;UBERON:0000349!3.92e-12!5;UBERON:0004111!5.32e-12!241;UBERON:0003076!5.39e-11!15;UBERON:0003057!5.39e-11!15;UBERON:0002298!7.77e-11!8;UBERON:0000477!2.46e-10!286;UBERON:0000483!1.16e-09!309;UBERON:0000119!1.76e-09!312;UBERON:0000064!2.68e-09!219;UBERON:0000369!9.58e-09!4;UBERON:0002435!9.58e-09!4;UBERON:0000204!9.58e-09!4;UBERON:0010082!9.58e-09!4;UBERON:0001954!1.11e-08!2;UBERON:0003022!1.11e-08!2;UBERON:0002421!1.11e-08!2;UBERON:0002600!1.11e-08!2;UBERON:0001870!1.94e-08!2;UBERON:0000475!4.94e-08!365;UBERON:0002021!9.36e-08!5;UBERON:0001872!3.06e-07!5;UBERON:0004733!3.46e-07!12;UBERON:0002028!3.46e-07!12;UBERON:0007277!3.46e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.26e-30;20!UBERON:0002619;4.85e-28;22!UBERON:0000956;6.59e-25;25!UBERON:0000203;6.59e-25;25!UBERON:0001871;1.36e-23;6!UBERON:0002771;3.44e-21;2!UBERON:0001893;5.36e-19;34!UBERON:0002791;5.42e-19;32!UBERON:0001869;5.42e-19;32!UBERON:0002114;1.31e-14;2!UBERON:0003528;2.27e-14;34!UBERON:0002020;2.27e-14;34!UBERON:0002780;2.22e-11;41!UBERON:0001890;2.22e-11;41!UBERON:0002108;2.63e-09;4!UBERON:0001872;3.22e-09;5!UBERON:0002021;3.22e-09;5!UBERON:0000922;3.36e-09;49!UBERON:0000073;1.05e-08;53!UBERON:0002616;1.05e-08;53!UBERON:0001017;1.95e-08;75!UBERON:0000200;5.73e-08;6!UBERON:0000955;1.56e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.22e-30,20;UBERON:0002619,4.68e-28,22;UBERON:0000956,6.39e-25,25;UBERON:0000203,6.39e-25,25;UBERON:0001871,1.44e-23,6;UBERON:0002771,3.11e-21,2;UBERON:0002791,8.18e-20,32;UBERON:0001869,8.18e-20,32;UBERON:0003528,9.96e-19,34;UBERON:0002020,9.96e-19,34;UBERON:0001893,9.96e-19,34;UBERON:0002780,9.75e-16,41;UBERON:0001890,9.75e-16,41;UBERON:0003080,9.75e-16,41;UBERON:0006240,9.75e-16,41;UBERON:0002114,1.40e-14,2;UBERON:0000073,2.11e-12,53;UBERON:0002616,2.11e-12,53;UBERON:0001049,8.70e-12,56;UBERON:0005068,8.70e-12,56;UBERON:0006241,8.70e-12,56;UBERON:0007135,8.70e-12,56;UBERON:0003056,6.84e-11,61;UBERON:0000955,1.01e-09,68;UBERON:0006238,1.01e-09,68;UBERON:0002108,2.74e-09,4;UBERON:0002021,2.97e-09,5;UBERON:0001872,3.22e-09,5;UBERON:0001017,2.69e-08,81;UBERON:0003075,2.69e-08,82;UBERON:0007284,2.69e-08,82;UBERON:0000200,5.54e-08,6;UBERON:0002346,6.09e-08,86;UBERON:0001016,1.53e-07,89 | |||
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|short_description=p1@AB384491 | |short_description=p1@AB384491 | ||
}} | }} |
Latest revision as of 01:09, 29 July 2015
Short description: | p1@AB384491 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB384491_5end |
Coexpression cluster: | C552_medial_temporal_occipital_parietal_duodenum_brain_spinal |
Association with transcript: | 74bp_to_AB384491_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neocortex | 1.22e-30 | 20 |
regional part of cerebral cortex | 4.68e-28 | 22 |
cerebral cortex | 6.39e-25 | 25 |
pallium | 6.39e-25 | 25 |
temporal lobe | 1.44e-23 | 6 |
middle temporal gyrus | 3.11e-21 | 2 |
regional part of telencephalon | 8.18e-20 | 32 |
cerebral hemisphere | 8.18e-20 | 32 |
brain grey matter | 9.96e-19 | 34 |
gray matter | 9.96e-19 | 34 |
telencephalon | 9.96e-19 | 34 |
regional part of forebrain | 9.75e-16 | 41 |
forebrain | 9.75e-16 | 41 |
anterior neural tube | 9.75e-16 | 41 |
future forebrain | 9.75e-16 | 41 |
duodenum | 1.40e-14 | 2 |
regional part of nervous system | 2.11e-12 | 53 |
regional part of brain | 2.11e-12 | 53 |
neural tube | 8.70e-12 | 56 |
neural rod | 8.70e-12 | 56 |
future spinal cord | 8.70e-12 | 56 |
neural keel | 8.70e-12 | 56 |
pre-chordal neural plate | 6.84e-11 | 61 |
brain | 1.01e-09 | 68 |
future brain | 1.01e-09 | 68 |
small intestine | 2.74e-09 | 4 |
occipital lobe | 2.97e-09 | 5 |
parietal lobe | 3.22e-09 | 5 |
central nervous system | 2.69e-08 | 81 |
neural plate | 2.69e-08 | 82 |
presumptive neural plate | 2.69e-08 | 82 |
gyrus | 5.54e-08 | 6 |
neurectoderm | 6.09e-08 | 86 |
nervous system | 1.53e-07 | 89 |