FFCP PHASE1:Hg19::chr2:163978208..163978214,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:163978208..163978214,+ | |||
|coexpression_cluster_id=C56 | |coexpression_cluster_id=C56 | ||
|description=CAGE_peak_at_chr2:163978208..163978214,+ | |description=CAGE_peak_at_chr2:163978208..163978214,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.23e-66;1!UBERON:0005062;9.45e-18;4!UBERON:0007284;9.45e-18;4!UBERON:0004872;8.16e-11;7 | |ontology_enrichment_development_v019=UBERON:0004140;1.23e-66;1!UBERON:0005062;9.45e-18;4!UBERON:0007284;9.45e-18;4!UBERON:0004872;8.16e-11;7 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002135!2.30e-21!1;UBERON:0002133!2.23e-11!2;UBERON:0000473!6.61e-11!8;UBERON:0003135!3.50e-08!11;UBERON:0003978!5.18e-08!3;UBERON:0009751!5.18e-08!3;UBERON:0000946!5.18e-08!3;UBERON:0002523!5.18e-08!3;UBERON:0005983!5.18e-08!3;UBERON:0002165!5.18e-08!3;UBERON:0002062!5.18e-08!3;UBERON:0007280!5.18e-08!3;UBERON:0000160!4.83e-07!27 | |ontology_enrichment_uberon=UBERON:0002135!2.30e-21!1;UBERON:0002133!2.23e-11!2;UBERON:0000473!6.61e-11!8;UBERON:0003135!3.50e-08!11;UBERON:0003978!5.18e-08!3;UBERON:0009751!5.18e-08!3;UBERON:0000946!5.18e-08!3;UBERON:0002523!5.18e-08!3;UBERON:0005983!5.18e-08!3;UBERON:0002165!5.18e-08!3;UBERON:0002062!5.18e-08!3;UBERON:0007280!5.18e-08!3;UBERON:0000160!4.83e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0002135;3.34e-66;1!UBERON:0002133;5.96e-34;2!UBERON:0003978;3.66e-23;3!UBERON:0000946;3.66e-23;3!UBERON:0002108;1.71e-14;4!UBERON:0000948;3.89e-13;22!UBERON:0007100;1.06e-11;25!UBERON:0010313;6.34e-08;10 | |ontology_enrichment_uberon_v019=UBERON:0002135;3.34e-66;1!UBERON:0002133;5.96e-34;2!UBERON:0003978;3.66e-23;3!UBERON:0000946;3.66e-23;3!UBERON:0002108;1.71e-14;4!UBERON:0000948;3.89e-13;22!UBERON:0007100;1.06e-11;25!UBERON:0010313;6.34e-08;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,4.66e-66,1;UBERON:0002133,7.05e-34,2;UBERON:0003978,4.09e-23,3;UBERON:0009751,4.09e-23,3;UBERON:0000946,4.09e-23,3;UBERON:0002523,4.09e-23,3;UBERON:0005983,4.09e-23,3;UBERON:0002165,4.09e-23,3;UBERON:0002062,4.09e-23,3;UBERON:0007280,4.09e-23,3;UBERON:0002108,1.60e-14,4;UBERON:0000948,3.97e-12,24;UBERON:0005498,3.97e-12,24;UBERON:0004140,3.97e-12,24;UBERON:0009881,3.97e-12,24;UBERON:0004141,3.97e-12,24;UBERON:0003084,3.97e-12,24;UBERON:0007005,3.97e-12,24;UBERON:0004139,3.97e-12,24;UBERON:0004291,3.97e-12,24;UBERON:0007100,6.56e-11,27;UBERON:0004797,9.89e-11,7;UBERON:0010313,6.56e-08,10;UBERON:0002342,6.56e-08,10;UBERON:0005062,6.56e-08,10 | |||
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|short_description=p@chr2:163978208..163978214,+ | |short_description=p@chr2:163978208..163978214,+ | ||
}} | }} |
Latest revision as of 02:01, 29 July 2015
Short description: | p@chr2:163978208..163978214, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:163978208..163978214, + |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mitral valve | 4.66e-66 | 1 |
atrioventricular valve | 7.05e-34 | 2 |
valve | 4.09e-23 | 3 |
cardiac mesenchyme | 4.09e-23 | 3 |
cardial valve | 4.09e-23 | 3 |
tunica intima | 4.09e-23 | 3 |
heart layer | 4.09e-23 | 3 |
endocardium | 4.09e-23 | 3 |
endocardial cushion | 4.09e-23 | 3 |
presumptive endocardium | 4.09e-23 | 3 |
small intestine | 1.60e-14 | 4 |
heart | 3.97e-12 | 24 |
primitive heart tube | 3.97e-12 | 24 |
primary heart field | 3.97e-12 | 24 |
anterior lateral plate mesoderm | 3.97e-12 | 24 |
heart tube | 3.97e-12 | 24 |
heart primordium | 3.97e-12 | 24 |
cardiac mesoderm | 3.97e-12 | 24 |
cardiogenic plate | 3.97e-12 | 24 |
heart rudiment | 3.97e-12 | 24 |
primary circulatory organ | 6.56e-11 | 27 |
blood vessel layer | 9.89e-11 | 7 |
neural crest-derived structure | 6.56e-08 | 10 |
neural crest | 6.56e-08 | 10 |
neural fold | 6.56e-08 | 10 |