FFCP PHASE1:Hg19::chr2:166185518..166185522,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:166185518..166185522,+ | |||
|coexpression_cluster_id=C2666 | |||
|description=CAGE_peak_at_chr2:166185518..166185522,+ | |description=CAGE_peak_at_chr2:166185518..166185522,+ | ||
|id=chr2:166185518..166185522,+ | |id=chr2:166185518..166185522,+ | ||
|ontology_enrichment_celltype=CL:1000306!8.30e-08!4;CL:0002547!8.30e-08!4 | |ontology_enrichment_celltype=CL:1000306!8.30e-08!4;CL:0002547!8.30e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000047;9.07e-18;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.81e-45;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.18e-41!57;UBERON:0005068!4.18e-41!57;UBERON:0006241!4.18e-41!57;UBERON:0007135!4.18e-41!57;UBERON:0001017!3.51e-37!82;UBERON:0002020!8.54e-37!34;UBERON:0003528!8.54e-37!34;UBERON:0002616!1.72e-36!59;UBERON:0002780!3.43e-36!41;UBERON:0001890!3.43e-36!41;UBERON:0006240!3.43e-36!41;UBERON:0001869!2.79e-35!32;UBERON:0003080!3.34e-35!42;UBERON:0000073!4.21e-35!94;UBERON:0001016!4.21e-35!94;UBERON:0005743!4.42e-35!86;UBERON:0002619!2.18e-33!22;UBERON:0001893!5.89e-33!34;UBERON:0000955!6.18e-32!69;UBERON:0006238!6.18e-32!69;UBERON:0002346!1.40e-31!90;UBERON:0003075!3.26e-31!86;UBERON:0007284!3.26e-31!86;UBERON:0002791!8.40e-31!33;UBERON:0000956!4.71e-29!25;UBERON:0000203!4.71e-29!25;UBERON:0001950!9.15e-28!20;UBERON:0007023!6.33e-23!115;UBERON:0003056!1.64e-22!61;UBERON:0000924!4.43e-20!173;UBERON:0006601!4.43e-20!173;UBERON:0004121!1.77e-19!169;UBERON:0000033!1.92e-17!123;UBERON:0000153!2.78e-16!129;UBERON:0007811!2.78e-16!129;UBERON:0000200!1.18e-13!6;UBERON:0000025!5.01e-13!194;UBERON:0000349!7.20e-11!5;UBERON:0002021!1.11e-10!5;UBERON:0000988!3.12e-10!3;UBERON:0004111!1.45e-09!241;UBERON:0002680!3.26e-09!9;UBERON:0001895!3.26e-09!9;UBERON:0010092!3.26e-09!9;UBERON:0002308!3.68e-09!9;UBERON:0000125!3.68e-09!9;UBERON:0000064!7.76e-09!219;UBERON:0000369!2.73e-08!4;UBERON:0002435!2.73e-08!4;UBERON:0000204!2.73e-08!4;UBERON:0010082!2.73e-08!4;UBERON:0001954!4.51e-08!2;UBERON:0003022!4.51e-08!2;UBERON:0002421!4.51e-08!2;UBERON:0002600!4.51e-08!2;UBERON:0000477!5.94e-08!286;UBERON:0000415!8.30e-08!4;UBERON:0007240!8.30e-08!4;UBERON:0005742!8.30e-08!4;UBERON:0005734!8.30e-08!4;UBERON:0004664!8.30e-08!4;UBERON:0004663!8.30e-08!4;UBERON:0002133!9.19e-08!2;UBERON:0001870!1.20e-07!2;UBERON:0002148!1.51e-07!2;UBERON:0009662!1.51e-07!2;UBERON:0003076!1.56e-07!15;UBERON:0003057!1.56e-07!15;UBERON:0001871!7.61e-07!7;UBERON:0004733!8.18e-07!12;UBERON:0002028!8.18e-07!12;UBERON:0007277!8.18e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001874;5.05e-34;1!UBERON:0002037;4.85e-23;6!UBERON:0002702;9.07e-18;2!UBERON:0002680;9.73e-16;9!UBERON:0001895;9.73e-16;9!UBERON:0001870;2.59e-12;3!UBERON:0005383;2.59e-12;3!UBERON:0005382;2.59e-12;3!UBERON:0004733;4.54e-12;12!UBERON:0002028;4.54e-12;12!UBERON:0004732;3.21e-11;13!UBERON:0000369;1.44e-09;4!UBERON:0002435;1.44e-09;4!UBERON:0000204;1.44e-09;4!UBERON:0000073;4.21e-08;53!UBERON:0002616;4.21e-08;53!UBERON:0000955;1.37e-07;68!UBERON:0001017;5.78e-07;75!UBERON:0000200;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,5.05e-34,1;UBERON:0002037,6.07e-23,6;UBERON:0006215,6.07e-23,6;UBERON:0002702,6.48e-18,2;UBERON:0002680,1.13e-15,9;UBERON:0001895,1.13e-15,9;UBERON:0010092,1.13e-15,9;UBERON:0001870,2.07e-12,3;UBERON:0005383,2.59e-12,3;UBERON:0005382,2.59e-12,3;UBERON:0004733,5.08e-12,12;UBERON:0002028,5.08e-12,12;UBERON:0007277,5.08e-12,12;UBERON:0004732,3.56e-11,13;UBERON:0001017,2.04e-10,81;UBERON:0000073,2.28e-10,53;UBERON:0002616,2.28e-10,53;UBERON:0001049,7.51e-10,56;UBERON:0005068,7.51e-10,56;UBERON:0006241,7.51e-10,56;UBERON:0007135,7.51e-10,56;UBERON:0003076,8.10e-10,15;UBERON:0003057,8.10e-10,15;UBERON:0000369,1.44e-09,4;UBERON:0002435,1.44e-09,4;UBERON:0000204,1.44e-09,4;UBERON:0010082,1.44e-09,4;UBERON:0001016,1.94e-09,89;UBERON:0000955,4.07e-08,68;UBERON:0006238,4.07e-08,68;UBERON:0003075,6.43e-07,82;UBERON:0007284,6.43e-07,82;UBERON:0000200,7.58e-07,6 | |||
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| ||
|short_description=p@chr2:166185518..166185522,+ | |short_description=p@chr2:166185518..166185522,+ | ||
}} | }} |
Latest revision as of 02:06, 29 July 2015
Short description: | p@chr2:166185518..166185522, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:166185518..166185522, + |
Coexpression cluster: | C2666_cerebellum_hippocampus_medial_Neural_parietal_occipital_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
putamen | 5.05e-34 | 1 |
cerebellum | 6.07e-23 | 6 |
rhombic lip | 6.07e-23 | 6 |
middle frontal gyrus | 6.48e-18 | 2 |
regional part of metencephalon | 1.13e-15 | 9 |
metencephalon | 1.13e-15 | 9 |
future metencephalon | 1.13e-15 | 9 |
frontal cortex | 2.07e-12 | 3 |
caudate-putamen | 2.59e-12 | 3 |
dorsal striatum | 2.59e-12 | 3 |
segmental subdivision of hindbrain | 5.08e-12 | 12 |
hindbrain | 5.08e-12 | 12 |
presumptive hindbrain | 5.08e-12 | 12 |
segmental subdivision of nervous system | 3.56e-11 | 13 |
central nervous system | 2.04e-10 | 81 |
regional part of nervous system | 2.28e-10 | 53 |
regional part of brain | 2.28e-10 | 53 |
neural tube | 7.51e-10 | 56 |
neural rod | 7.51e-10 | 56 |
future spinal cord | 7.51e-10 | 56 |
neural keel | 7.51e-10 | 56 |
posterior neural tube | 8.10e-10 | 15 |
chordal neural plate | 8.10e-10 | 15 |
corpus striatum | 1.44e-09 | 4 |
striatum | 1.44e-09 | 4 |
ventral part of telencephalon | 1.44e-09 | 4 |
future corpus striatum | 1.44e-09 | 4 |
nervous system | 1.94e-09 | 89 |
brain | 4.07e-08 | 68 |
future brain | 4.07e-08 | 68 |
neural plate | 6.43e-07 | 82 |
presumptive neural plate | 6.43e-07 | 82 |
gyrus | 7.58e-07 | 6 |