FFCP PHASE1:Hg19::chr2:189676295..189676298,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:189676295..189676298,- | |||
|description=CAGE_peak_at_chr2:189676295..189676298,- | |description=CAGE_peak_at_chr2:189676295..189676298,- | ||
|id=chr2:189676295..189676298,- | |id=chr2:189676295..189676298,- | ||
|ontology_enrichment_celltype=CL:0000187!5.39e-17!54;CL:0002594!2.27e-16!4;CL:0000680!6.86e-16!57;CL:0000056!6.86e-16!57;CL:0000355!6.86e-16!57;CL:0000183!3.23e-15!59;CL:0000393!6.75e-15!60;CL:0000211!6.75e-15!60;CL:0000055!2.11e-13!180;CL:0000192!4.46e-13!42;CL:0000514!4.46e-13!42;CL:0000359!8.62e-13!32;CL:0000048!3.65e-10!430;CL:0000723!6.88e-10!436;CL:0000034!1.56e-09!444;CL:0002589!2.01e-08!2;CL:0002371!1.13e-07!591;CL:0000188!4.91e-07!9;CL:0002521!9.09e-07!3 | |ontology_enrichment_celltype=CL:0000187!5.39e-17!54;CL:0002594!2.27e-16!4;CL:0000680!6.86e-16!57;CL:0000056!6.86e-16!57;CL:0000355!6.86e-16!57;CL:0000183!3.23e-15!59;CL:0000393!6.75e-15!60;CL:0000211!6.75e-15!60;CL:0000055!2.11e-13!180;CL:0000192!4.46e-13!42;CL:0000514!4.46e-13!42;CL:0000359!8.62e-13!32;CL:0000048!3.65e-10!430;CL:0000723!6.88e-10!436;CL:0000034!1.56e-09!444;CL:0002589!2.01e-08!2;CL:0002371!1.13e-07!591;CL:0000188!4.91e-07!9;CL:0002521!9.09e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002521;1.31e-14;3!CL:0000346;1.83e-14;3!CL:1000428;1.83e-14;3!CL:1000306;2.66e-11;4!CL:0002547;2.66e-11;4!CL:0002559;3.22e-09;5!CL:0002569;6.78e-08;6!CL:0002548;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,1.40e-14,3;CL:0000346,1.83e-14,3;CL:1000428,1.83e-14,3;CL:1000306,2.53e-11,4;CL:0002547,2.53e-11,4;CL:0002559,3.22e-09,5;CL:0002569,6.34e-08,6;CL:0002548,7.25e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001310!2.27e-16!4;UBERON:0001134!1.38e-14!61;UBERON:0002036!1.38e-14!61;UBERON:0003082!1.38e-14!61;UBERON:0002385!5.33e-14!63;UBERON:0001015!5.33e-14!63;UBERON:0000383!5.33e-14!63;UBERON:0004290!5.53e-14!70;UBERON:0004872!1.04e-12!84;UBERON:0000486!2.50e-11!82;UBERON:0001637!2.83e-11!42;UBERON:0003509!2.83e-11!42;UBERON:0004572!2.83e-11!42;UBERON:0000914!3.84e-11!83;UBERON:0002329!3.84e-11!83;UBERON:0003077!3.84e-11!83;UBERON:0003059!3.84e-11!83;UBERON:0007282!3.84e-11!83;UBERON:0009618!3.84e-11!83;UBERON:0007285!3.84e-11!83;UBERON:0004535!1.20e-08!110;UBERON:0001981!1.95e-08!60;UBERON:0007500!1.95e-08!60;UBERON:0004537!1.95e-08!60;UBERON:0006965!1.95e-08!60;UBERON:0001529!2.01e-08!2;UBERON:0007204!2.01e-08!2;UBERON:0001009!2.64e-08!113;UBERON:0002072!4.95e-08!5;UBERON:0000055!5.45e-07!69;UBERON:0003914!7.76e-07!118;UBERON:0002049!8.36e-07!79;UBERON:0007798!8.36e-07!79;UBERON:0002190!9.09e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;1.31e-14;3!UBERON:0000412;1.83e-14;3!UBERON:0001992;1.83e-14;3!UBERON:0004797;2.66e-11;4!UBERON:0000415;2.66e-11;4!UBERON:0007240;2.66e-11;4!UBERON:0005742;2.66e-11;4!UBERON:0005734;2.66e-11;4!UBERON:0004664;2.66e-11;4!UBERON:0004663;2.66e-11;4!UBERON:0002072;2.63e-09;5!UBERON:0002073;3.22e-09;5!UBERON:0003422;6.78e-08;6!UBERON:0003104;6.04e-07;7!UBERON:0009142;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.40e-14,3;UBERON:0000412,1.83e-14,3;UBERON:0001992,1.83e-14,3;UBERON:0000415,2.53e-11,4;UBERON:0007240,2.53e-11,4;UBERON:0005742,2.53e-11,4;UBERON:0005734,2.53e-11,4;UBERON:0004664,2.53e-11,4;UBERON:0004663,2.53e-11,4;UBERON:0002072,2.74e-09,5;UBERON:0002073,3.22e-09,5;UBERON:0005086,3.22e-09,5;UBERON:0003422,6.34e-08,6;UBERON:0004797,5.08e-07,7 | |||
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| ||
|short_description=p@chr2:189676295..189676298,- | |short_description=p@chr2:189676295..189676298,- | ||
}} | }} |
Latest revision as of 04:14, 29 July 2015
Short description: | p@chr2:189676295..189676298, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:189676295..189676298, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 1.40e-14 | 3 |
hair follicle dermal papilla cell | 1.83e-14 | 3 |
stem cell of epidermis | 1.83e-14 | 3 |
fibroblast of tunica adventitia of artery | 2.53e-11 | 4 |
fibroblast of the aortic adventitia | 2.53e-11 | 4 |
hair follicle cell | 3.22e-09 | 5 |
mesenchymal stem cell of umbilical cord | 6.34e-08 | 6 |
cardiac fibroblast | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 1.40e-14 | 3 |
dermal papilla | 1.83e-14 | 3 |
papillary layer of dermis | 1.83e-14 | 3 |
artery wall | 2.53e-11 | 4 |
tunica adventitia of artery | 2.53e-11 | 4 |
adventitia | 2.53e-11 | 4 |
tunica adventitia of blood vessel | 2.53e-11 | 4 |
aorta tunica adventitia | 2.53e-11 | 4 |
aorta wall | 2.53e-11 | 4 |
hypodermis | 2.74e-09 | 5 |
hair follicle | 3.22e-09 | 5 |
hair follicle placode | 3.22e-09 | 5 |
mesenchyme of umbilical cord | 6.34e-08 | 6 |
blood vessel layer | 5.08e-07 | 7 |