FFCP PHASE1:Hg19::chr2:218875447..218875463,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:218875447..218875463,- | |||
|description=CAGE_peak_at_chr2:218875447..218875463,- | |||
|id=chr2:218875447..218875463,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;4.03e-45;5!CL:0002321;1.31e-15;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!8.38e-34!10;DOID:169!5.74e-18!6;DOID:3095!1.68e-17!22;DOID:2994!1.68e-17!22 | |||
|ontology_enrichment_disease_v019=DOID:171;4.63e-120;10!DOID:3095;8.08e-55;22!DOID:2994;8.08e-55;22!DOID:169;9.18e-38;6!DOID:3193;8.82e-14;2!DOID:962;8.82e-14;2!DOID:1192;1.24e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.56e-120,10;DOID:3095,7.16e-55,22;DOID:2994,7.16e-55,22;DOID:169,9.19e-38,6;DOID:3193,9.40e-14,2;DOID:962,9.40e-14,2;DOID:1192,1.30e-09,3;DOID:0050687,1.64e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000013!1.27e-21!5;UBERON:0002410!1.27e-21!5;UBERON:0000010!7.30e-12!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.58e-98;4!UBERON:0000923;2.58e-98;4!UBERON:0010316;2.58e-98;4!UBERON:0005291;2.58e-98;4!UBERON:0002050;7.85e-79;5!UBERON:0005423;7.85e-79;5!UBERON:0000013;4.03e-45;5!UBERON:0002410;4.03e-45;5!UBERON:0000010;1.77e-25;8!UBERON:0003714;8.82e-14;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,4.03e-45,5;UBERON:0002410,4.03e-45,5;UBERON:0000010,1.77e-25,8;UBERON:0003714,9.40e-14,2;UBERON:0004121,5.65e-07,171;UBERON:0000924,5.65e-07,171;UBERON:0006601,5.65e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,1.16641845353302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.517131825446202,0,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,7.43991198637104,0.629063767423586,1.20130602011215,1.18812770967818,6.37724760305049,3.96594445628807,3.35186950783946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,1.58284119923659,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0.631086248772738,0,0,0,0,0,0.865253124247578,0,0,0,0,0,0.0918948995348449,0,0,0,0,0.103432995861895,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p@chr2:218875447..218875463,- | |||
}} |
Latest revision as of 06:33, 29 July 2015
Short description: | p@chr2:218875447..218875463, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:218875447..218875463, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 4.03e-45 | 5 |
autonomic nervous system | 4.03e-45 | 5 |
peripheral nervous system | 1.77e-25 | 8 |
neural tissue | 9.40e-14 | 2 |
ectoderm-derived structure | 5.65e-07 | 171 |
ectoderm | 5.65e-07 | 171 |
presumptive ectoderm | 5.65e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.56e-120 | 10 |
germ cell and embryonal cancer | 7.16e-55 | 22 |
germ cell cancer | 7.16e-55 | 22 |
neuroendocrine tumor | 9.19e-38 | 6 |
peripheral nerve sheath neoplasm | 9.40e-14 | 2 |
neurofibroma | 9.40e-14 | 2 |
peripheral nervous system neoplasm | 1.30e-09 | 3 |
cell type cancer | 1.64e-08 | 143 |