FFCP PHASE1:Hg19::chr2:28571261..28571277,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:28571261..28571277,+ | |||
|coexpression_cluster_id=C578 | |coexpression_cluster_id=C578 | ||
|description=CAGE_peak_at_chr2:28571261..28571277,+ | |description=CAGE_peak_at_chr2:28571261..28571277,+ | ||
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|ontology_enrichment_celltype_v019_2=CL:0000623,9.06e-18,3;CL:0000825,9.06e-18,3;CL:0000453,1.81e-17,5;CL:0000226,5.51e-17,3;CL:0000842,5.51e-17,3;CL:0000767,6.48e-17,3;CL:0000037,1.83e-14,168;CL:0000738,3.38e-14,136;CL:0000791,1.39e-13,18;CL:0000789,1.39e-13,18;CL:0002420,1.39e-13,18;CL:0002419,1.39e-13,18;CL:0000790,1.39e-13,18;CL:0000988,1.86e-13,177;CL:0000625,4.19e-12,11;CL:0000094,3.87e-11,8;CL:0002032,5.11e-10,161;CL:0000837,5.11e-10,161;CL:0000990,9.24e-10,8;CL:0000084,1.58e-09,25;CL:0000827,1.58e-09,25;CL:0000838,1.42e-08,52;CL:0000542,2.23e-08,53;CL:0000051,2.23e-08,53;CL:0000081,4.04e-08,11;CL:0000451,5.34e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000790;1.21e-13;18 | |ontology_enrichment_development_v019=CL:0000790;1.21e-13;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.29e-21!102;UBERON:0003061!1.29e-21!102;UBERON:0002193!9.71e-20!112;UBERON:0002371!7.67e-12!80;UBERON:0001474!1.99e-11!86;UBERON:0000178!4.03e-10!15;UBERON:0000179!4.03e-10!15;UBERON:0000463!4.03e-10!15;UBERON:0002405!1.68e-09!115;UBERON:0004765!1.19e-08!101;UBERON:0001434!1.19e-08!101;UBERON:0002384!7.36e-08!375 | |ontology_enrichment_uberon=UBERON:0002390!1.29e-21!102;UBERON:0003061!1.29e-21!102;UBERON:0002193!9.71e-20!112;UBERON:0002371!7.67e-12!80;UBERON:0001474!1.99e-11!86;UBERON:0000178!4.03e-10!15;UBERON:0000179!4.03e-10!15;UBERON:0000463!4.03e-10!15;UBERON:0002405!1.68e-09!115;UBERON:0004765!1.19e-08!101;UBERON:0001434!1.19e-08!101;UBERON:0002384!7.36e-08!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.90e-12;15!UBERON:0000179;2.90e-12;15!UBERON:0000463;2.90e-12;15!UBERON:0002390;3.95e-09;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.90e-12;15!UBERON:0000179;2.90e-12;15!UBERON:0000463;2.90e-12;15!UBERON:0002390;3.95e-09;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.92e-12,15;UBERON:0000179,1.92e-12,15;UBERON:0000463,1.92e-12,15 | |||
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|short_description=p@chr2:28571261..28571277,+ | |short_description=p@chr2:28571261..28571277,+ | ||
}} | }} |
Latest revision as of 09:19, 29 July 2015
Short description: | p@chr2:28571261..28571277, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:28571261..28571277, + |
Coexpression cluster: | C578_CD34_Natural_CD8_CD4_CD133_Basophils_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 9.06e-18 | 3 |
pro-NK cell | 9.06e-18 | 3 |
Langerhans cell | 1.81e-17 | 5 |
single nucleate cell | 5.51e-17 | 3 |
mononuclear cell | 5.51e-17 | 3 |
basophil | 6.48e-17 | 3 |
hematopoietic stem cell | 1.83e-14 | 168 |
leukocyte | 3.38e-14 | 136 |
mature alpha-beta T cell | 1.39e-13 | 18 |
alpha-beta T cell | 1.39e-13 | 18 |
immature T cell | 1.39e-13 | 18 |
mature T cell | 1.39e-13 | 18 |
immature alpha-beta T cell | 1.39e-13 | 18 |
hematopoietic cell | 1.86e-13 | 177 |
CD8-positive, alpha-beta T cell | 4.19e-12 | 11 |
granulocyte | 3.87e-11 | 8 |
hematopoietic oligopotent progenitor cell | 5.11e-10 | 161 |
hematopoietic multipotent progenitor cell | 5.11e-10 | 161 |
conventional dendritic cell | 9.24e-10 | 8 |
T cell | 1.58e-09 | 25 |
pro-T cell | 1.58e-09 | 25 |
lymphoid lineage restricted progenitor cell | 1.42e-08 | 52 |
lymphocyte | 2.23e-08 | 53 |
common lymphoid progenitor | 2.23e-08 | 53 |
blood cell | 4.04e-08 | 11 |
dendritic cell | 5.34e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
blood | 1.92e-12 | 15 |
haemolymphatic fluid | 1.92e-12 | 15 |
organism substance | 1.92e-12 | 15 |