FFCP PHASE1:Hg19::chr2:50549170..50549173,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:50549170..50549173,- | |||
|coexpression_cluster_id=C2702 | |||
|description=CAGE_peak_at_chr2:50549170..50549173,- | |description=CAGE_peak_at_chr2:50549170..50549173,- | ||
|id=chr2:50549170..50549173,- | |id=chr2:50549170..50549173,- | ||
|ontology_enrichment_celltype=CL:0000242!2.86e-07!2 | |ontology_enrichment_celltype=CL:0000242!2.86e-07!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.76e-45!82;UBERON:0001049!1.34e-44!57;UBERON:0005068!1.34e-44!57;UBERON:0006241!1.34e-44!57;UBERON:0007135!1.34e-44!57;UBERON:0005743!3.17e-42!86;UBERON:0000073!7.24e-42!94;UBERON:0001016!7.24e-42!94;UBERON:0002780!3.85e-38!41;UBERON:0001890!3.85e-38!41;UBERON:0006240!3.85e-38!41;UBERON:0000955!1.54e-37!69;UBERON:0006238!1.54e-37!69;UBERON:0002616!4.19e-37!59;UBERON:0003080!4.32e-37!42;UBERON:0002619!1.93e-34!22;UBERON:0001950!1.43e-33!20;UBERON:0001893!1.63e-32!34;UBERON:0001869!1.26e-31!32;UBERON:0003075!7.20e-31!86;UBERON:0007284!7.20e-31!86;UBERON:0002791!2.58e-30!33;UBERON:0000956!6.19e-30!25;UBERON:0000203!6.19e-30!25;UBERON:0002020!1.51e-29!34;UBERON:0003528!1.51e-29!34;UBERON:0002346!4.15e-29!90;UBERON:0004121!1.40e-25!169;UBERON:0000924!9.79e-25!173;UBERON:0006601!9.79e-25!173;UBERON:0007023!5.00e-24!115;UBERON:0003056!1.29e-23!61;UBERON:0000153!2.80e-23!129;UBERON:0007811!2.80e-23!129;UBERON:0000033!8.36e-22!123;UBERON:0001872!2.95e-15!5;UBERON:0000025!2.41e-12!194;UBERON:0002021!2.89e-10!5;UBERON:0001871!1.54e-09!7;UBERON:0004111!6.51e-09!241;UBERON:0003076!7.46e-09!15;UBERON:0003057!7.46e-09!15;UBERON:0000200!2.22e-08!6;UBERON:0000477!6.48e-08!286;UBERON:0000475!3.21e-07!365;UBERON:0000483!3.23e-07!309;UBERON:0000119!4.67e-07!312;UBERON:0001894!5.66e-07!7;UBERON:0006222!5.66e-07!7;UBERON:0001897!6.11e-07!2;UBERON:0000341!8.48e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.56e-29;20!UBERON:0002619;5.29e-27;22!UBERON:0000956;6.16e-24;25!UBERON:0000203;6.16e-24;25!UBERON:0001872;1.10e-20;5!UBERON:0003528;8.02e-17;34!UBERON:0002020;8.02e-17;34!UBERON:0002791;6.01e-16;32!UBERON:0001869;8.80e-16;32!UBERON:0001871;4.37e-15;6!UBERON:0001893;5.93e-14;34!UBERON:0002771;1.37e-13;2!UBERON:0002780;1.85e-12;41!UBERON:0001890;1.85e-12;41!UBERON:0000955;1.61e-10;68!UBERON:0000073;1.09e-09;53!UBERON:0002616;1.09e-09;53!UBERON:0000922;2.13e-08;49!UBERON:0001017;2.68e-08;75!UBERON:0001016;8.03e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.57e-29,20;UBERON:0002619,5.29e-27,22;UBERON:0000956,6.16e-24,25;UBERON:0000203,6.16e-24,25;UBERON:0001872,1.34e-20,5;UBERON:0002791,6.09e-19,32;UBERON:0001869,6.09e-19,32;UBERON:0003528,7.03e-18,34;UBERON:0002020,7.03e-18,34;UBERON:0001893,7.03e-18,34;UBERON:0001871,4.07e-15,6;UBERON:0002780,5.92e-15,41;UBERON:0001890,5.92e-15,41;UBERON:0003080,5.92e-15,41;UBERON:0006240,5.92e-15,41;UBERON:0002771,1.21e-13,2;UBERON:0000955,7.60e-13,68;UBERON:0006238,7.60e-13,68;UBERON:0000073,1.08e-11,53;UBERON:0002616,1.08e-11,53;UBERON:0001049,4.33e-11,56;UBERON:0005068,4.33e-11,56;UBERON:0006241,4.33e-11,56;UBERON:0007135,4.33e-11,56;UBERON:0001017,7.53e-11,81;UBERON:0003056,3.25e-10,61;UBERON:0001016,8.55e-10,89;UBERON:0003075,1.12e-07,82;UBERON:0007284,1.12e-07,82;UBERON:0002346,2.49e-07,86 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.281338832821026,0,0,6.5448876519678,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,3.99227596002388,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0.663475559587348,0.591095237907095,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,2.44858209304392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0.544813624446302,0.160753148465019,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.625954653532499,0,0.110929051536852,0,0,0,0,0,0,0.468334905806882,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0,0.157265941855896,0,0,0,0,0,0,0,0.80057074828547,0,0,0.128458450192919,0,0.638535436228605,0.82046545696302,2.7727886584389,0.0691572524642179,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0.781078098613847,1.03343398250592,0.0634158101939068,2.18789923607288,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.203909198930495,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0.11294608203896,0.109940516745429,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0.829169439458779,0.103432995861895,0.213233981900981,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.281338832821026,0,0,6.5448876519678,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,3.99227596002388,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0.663475559587348,0.591095237907095,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,2.44858209304392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0.544813624446302,0.160753148465019,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.625954653532499,0,0.110929051536852,0,0,0,0,0,0,0.468334905806882,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0,0.157265941855896,0,0,0,0,0,0,0,0.80057074828547,0,0,0.128458450192919,0,0.638535436228605,0.82046545696302,2.7727886584389,0.0691572524642179,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0.781078098613847,1.03343398250592,0.0634158101939068,2.18789923607288,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.203909198930495,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0.11294608203896,0.109940516745429,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0.829169439458779,0.103432995861895,0.213233981900981,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr2:50549170..50549173,- | |short_description=p@chr2:50549170..50549173,- | ||
}} | }} |
Latest revision as of 10:42, 29 July 2015
Short description: | p@chr2:50549170..50549173, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:50549170..50549173, - |
Coexpression cluster: | C2702_anaplastic_duodenum_parietal_occipital_brain_nonsmall_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neocortex | 1.57e-29 | 20 |
regional part of cerebral cortex | 5.29e-27 | 22 |
cerebral cortex | 6.16e-24 | 25 |
pallium | 6.16e-24 | 25 |
parietal lobe | 1.34e-20 | 5 |
regional part of telencephalon | 6.09e-19 | 32 |
cerebral hemisphere | 6.09e-19 | 32 |
brain grey matter | 7.03e-18 | 34 |
gray matter | 7.03e-18 | 34 |
telencephalon | 7.03e-18 | 34 |
temporal lobe | 4.07e-15 | 6 |
regional part of forebrain | 5.92e-15 | 41 |
forebrain | 5.92e-15 | 41 |
anterior neural tube | 5.92e-15 | 41 |
future forebrain | 5.92e-15 | 41 |
middle temporal gyrus | 1.21e-13 | 2 |
brain | 7.60e-13 | 68 |
future brain | 7.60e-13 | 68 |
regional part of nervous system | 1.08e-11 | 53 |
regional part of brain | 1.08e-11 | 53 |
neural tube | 4.33e-11 | 56 |
neural rod | 4.33e-11 | 56 |
future spinal cord | 4.33e-11 | 56 |
neural keel | 4.33e-11 | 56 |
central nervous system | 7.53e-11 | 81 |
pre-chordal neural plate | 3.25e-10 | 61 |
nervous system | 8.55e-10 | 89 |
neural plate | 1.12e-07 | 82 |
presumptive neural plate | 1.12e-07 | 82 |
neurectoderm | 2.49e-07 | 86 |