FFCP PHASE1:Hg19::chr3:129334636..129334653,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:129334636..129334653,-
|short_description=p1@BC025331
|description=CAGE_peak_1_at_BC025331_5end
|association_with_transcript=-471bp_to_BC025331_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-471bp_to_BC025331_5end | |||
|cluster_id=chr3:129334636..129334653,- | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_1_at_BC025331_5end | |||
|id=chr3:129334636..129334653,- | |||
|ontology_enrichment_celltype=CL:0000766!2.20e-32!76;CL:0000839!7.91e-31!70;CL:0000557!2.70e-30!71;CL:0002194!1.61e-24!63;CL:0000576!1.61e-24!63;CL:0000040!1.61e-24!63;CL:0000559!1.61e-24!63;CL:0002009!1.39e-23!65;CL:0000763!4.54e-21!112;CL:0000049!4.54e-21!112;CL:0000738!1.36e-16!140;CL:0002031!1.25e-15!124;CL:0000988!3.97e-15!182;CL:0000037!4.91e-13!172;CL:0000566!4.91e-13!172;CL:0002393!6.41e-13!9;CL:0002397!6.41e-13!9;CL:0002032!7.07e-13!165;CL:0000837!7.07e-13!165;CL:0000235!1.05e-12!10;CL:0002087!1.95e-12!119;CL:0002274!5.94e-12!5;CL:0000457!5.94e-12!5;CL:0002191!5.94e-12!5;CL:0000097!5.94e-12!5;CL:0000831!5.94e-12!5;CL:0002028!5.94e-12!5;CL:0002619!4.57e-11!3;CL:0000875!1.02e-10!3;CL:0002396!1.02e-10!3;CL:0000080!2.01e-09!6;CL:0002057!4.34e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.93e-79;6!CL:0000097;3.65e-42;5!CL:0000163;1.24e-23;9!CL:0000473;1.71e-10;39!CL:0000234;1.71e-10;39!CL:0000840;7.76e-10;5!CL:0000766;1.59e-09;69!CL:0000990;7.64e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.56e-79,6;CL:0000097,1.83e-42,5;CL:0002028,1.83e-42,5;CL:0000839,3.50e-27,66;CL:0000557,9.16e-27,67;CL:0000766,7.60e-25,72;CL:0000163,8.48e-24,9;CL:0000763,3.31e-16,108;CL:0000049,3.31e-16,108;CL:0002031,1.83e-14,120;CL:0002194,1.75e-13,59;CL:0000576,1.75e-13,59;CL:0000040,1.75e-13,59;CL:0000559,1.75e-13,59;CL:0000988,4.36e-13,177;CL:0002009,5.05e-13,61;CL:0000738,1.31e-12,136;CL:0002032,1.92e-10,161;CL:0000837,1.92e-10,161;CL:0000037,5.99e-10,168;CL:0000840,7.10e-10,5;CL:0001029,7.10e-10,5;CL:0000473,1.01e-09,48;CL:0000234,1.01e-09,48;CL:0000990,7.21e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;9.36e-15;1!UBERON:0006518;9.36e-15;1!UBERON:0008949;9.36e-15;1!UBERON:0000101;9.36e-15;1!UBERON:0002167;9.36e-15;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.02e-24,98;UBERON:0003061,1.02e-24,98;UBERON:0002371,1.73e-23,76;UBERON:0002193,2.54e-22,108;UBERON:0001474,1.07e-21,82;UBERON:0004765,1.12e-19,90;UBERON:0002405,5.24e-19,93;UBERON:0001434,1.35e-17,100;UBERON:0002171,1.07e-14,1;UBERON:0006518,1.07e-14,1;UBERON:0008949,1.07e-14,1;UBERON:0000101,1.07e-14,1;UBERON:0002167,1.07e-14,1;UBERON:0003081,3.24e-11,203;UBERON:0002204,5.13e-10,167 | |||
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| ||
|short_description=p1@BC025331 | |||
}} | }} |
Latest revision as of 15:44, 29 July 2015
Short description: | p1@BC025331 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC025331_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | -471bp_to_BC025331_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.56e-79 | 6 |
mast cell | 1.83e-42 | 5 |
basophil mast progenitor cell | 1.83e-42 | 5 |
myeloid lineage restricted progenitor cell | 3.50e-27 | 66 |
granulocyte monocyte progenitor cell | 9.16e-27 | 67 |
myeloid leukocyte | 7.60e-25 | 72 |
endocrine cell | 8.48e-24 | 9 |
myeloid cell | 3.31e-16 | 108 |
common myeloid progenitor | 3.31e-16 | 108 |
hematopoietic lineage restricted progenitor cell | 1.83e-14 | 120 |
monopoietic cell | 1.75e-13 | 59 |
monocyte | 1.75e-13 | 59 |
monoblast | 1.75e-13 | 59 |
promonocyte | 1.75e-13 | 59 |
hematopoietic cell | 4.36e-13 | 177 |
macrophage dendritic cell progenitor | 5.05e-13 | 61 |
leukocyte | 1.31e-12 | 136 |
hematopoietic oligopotent progenitor cell | 1.92e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.92e-10 | 161 |
hematopoietic stem cell | 5.99e-10 | 168 |
immature conventional dendritic cell | 7.10e-10 | 5 |
common dendritic progenitor | 7.10e-10 | 5 |
defensive cell | 1.01e-09 | 48 |
phagocyte | 1.01e-09 | 48 |
conventional dendritic cell | 7.21e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.02e-24 | 98 |
blood island | 1.02e-24 | 98 |
bone marrow | 1.73e-23 | 76 |
hemolymphoid system | 2.54e-22 | 108 |
bone element | 1.07e-21 | 82 |
skeletal element | 1.12e-19 | 90 |
immune system | 5.24e-19 | 93 |
skeletal system | 1.35e-17 | 100 |
lower lobe of right lung | 1.07e-14 | 1 |
right lung lobe | 1.07e-14 | 1 |
lower lobe of lung | 1.07e-14 | 1 |
lobe of lung | 1.07e-14 | 1 |
right lung | 1.07e-14 | 1 |
lateral plate mesoderm | 3.24e-11 | 203 |
musculoskeletal system | 5.13e-10 | 167 |