FFCP PHASE1:Hg19::chr3:170916991..170916995,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:170916991..170916995,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_at_chr3:170916991..170916995,- | |description=CAGE_peak_at_chr3:170916991..170916995,- | ||
|id=chr3:170916991..170916995,- | |id=chr3:170916991..170916995,- | ||
|ontology_enrichment_celltype=CL:0002274!7.67e-10!5;CL:0000457!7.67e-10!5;CL:0002191!7.67e-10!5;CL:0000097!7.67e-10!5;CL:0000831!7.67e-10!5;CL:0002028!7.67e-10!5;CL:0000163!1.41e-09!9 | |ontology_enrichment_celltype=CL:0002274!7.67e-10!5;CL:0000457!7.67e-10!5;CL:0002191!7.67e-10!5;CL:0000097!7.67e-10!5;CL:0000831!7.67e-10!5;CL:0002028!7.67e-10!5;CL:0000163!1.41e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0000511;3.34e-66;1!CL:0002625;3.34e-66;1!CL:0000216;3.34e-66;1!CL:0000097;1.40e-14;5!CL:0000154;2.59e-12;6!CL:0000163;1.04e-08;9!CL:0000151;5.54e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,4.66e-66,1;CL:0002625,4.66e-66,1;CL:0000216,4.66e-66,1;CL:0000097,1.40e-14,5;CL:0002028,1.40e-14,5;CL:0000154,2.74e-12,6;CL:0000163,1.04e-08,9;CL:0000151,1.85e-08,36 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.55e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.43e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;3.34e-66;1!UBERON:0001343;3.34e-66;1!UBERON:0004910;3.34e-66;1!UBERON:0004813;3.34e-66;1!UBERON:0004909;5.96e-34;2!UBERON:0005904;9.45e-18;4!UBERON:0000473;1.41e-09;8!UBERON:0000058;6.34e-08;10!UBERON:0003135;2.55e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,4.66e-66,1;UBERON:0001343,4.66e-66,1;UBERON:0004910,4.66e-66,1;UBERON:0005154,4.66e-66,1;UBERON:0005295,4.66e-66,1;UBERON:0004813,4.66e-66,1;UBERON:0005297,4.66e-66,1;UBERON:0005294,4.66e-66,1;UBERON:0010141,4.66e-66,1;UBERON:0005891,4.66e-66,1;UBERON:0004909,7.05e-34,2;UBERON:0005904,1.03e-17,4;UBERON:0000473,1.47e-09,8;UBERON:0004871,1.47e-09,8;UBERON:0003135,2.63e-07,11;UBERON:0004876,2.63e-07,11 | |||
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| ||
|short_description=p@chr3:170916991..170916995,- | |short_description=p@chr3:170916991..170916995,- | ||
}} | }} |
Latest revision as of 18:13, 29 July 2015
Short description: | p@chr3:170916991..170916995, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:170916991..170916995, - |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 4.66e-66 | 1 |
seminiferous tubule epithelial cell | 4.66e-66 | 1 |
Sertoli cell | 4.66e-66 | 1 |
mast cell | 1.40e-14 | 5 |
basophil mast progenitor cell | 1.40e-14 | 5 |
protein secreting cell | 2.74e-12 | 6 |
endocrine cell | 1.04e-08 | 9 |
secretory cell | 1.85e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 4.66e-66 | 1 |
seminiferous tubule of testis | 4.66e-66 | 1 |
epithelium of male gonad | 4.66e-66 | 1 |
epithelial cord | 4.66e-66 | 1 |
sex cord | 4.66e-66 | 1 |
seminiferous tubule epithelium | 4.66e-66 | 1 |
testis sex cord | 4.66e-66 | 1 |
genital ridge | 4.66e-66 | 1 |
primitive sex cord of indifferent gonad | 4.66e-66 | 1 |
coelomic epithelium | 4.66e-66 | 1 |
epithelium of gonad | 7.05e-34 | 2 |
duct of male reproductive system | 1.03e-17 | 4 |
testis | 1.47e-09 | 8 |
somatic layer of lateral plate mesoderm | 1.47e-09 | 8 |
male reproductive organ | 2.63e-07 | 11 |
urogenital ridge | 2.63e-07 | 11 |