FFCP PHASE1:Hg19::chr3:87039601..87039605,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:87039601..87039605,- | |||
|coexpression_cluster_id=C461 | |coexpression_cluster_id=C461 | ||
|description=CAGE_peak_at_chr3:87039601..87039605,- | |description=CAGE_peak_at_chr3:87039601..87039605,- | ||
|id=chr3:87039601..87039605,- | |id=chr3:87039601..87039605,- | ||
|ontology_enrichment_celltype=CL:0002541;4.09e-23;3 | |ontology_enrichment_celltype=CL:0002541!9.50e-13!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0002541;4.09e-23;3 | ||
|ontology_enrichment_disease=DOID:1749;5.89e-20;14 | |ontology_enrichment_celltype_v019_2=CL:0002541,4.09e-23,3 | ||
|ontology_enrichment_uberon=UBERON:0001723;2.62e-23;3!UBERON:0001033;2.62e-23;3!UBERON:0003124;4.09e-23;3!UBERON:0000920;4.09e-23;3!UBERON:0003343;7.35e-18;4!UBERON:0004785;7.35e-18;4!UBERON:0000974;2.19e-12;6!UBERON:0005631;6.56e-08;10!UBERON:0000158;6.56e-08;10 | |ontology_enrichment_development_v019=UBERON:0008814;3.61e-34;2!UBERON:0010056;3.61e-34;2 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;5.89e-20;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.89e-20,14 | |||
|ontology_enrichment_uberon=UBERON:0000476!9.50e-13!3;UBERON:0000920!9.50e-13!3;UBERON:0003124!5.13e-09!7;UBERON:0004923!4.13e-07!57;UBERON:0002046!7.46e-07!5;UBERON:0004117!7.46e-07!5;UBERON:0007689!7.46e-07!5;UBERON:0007123!7.46e-07!5;UBERON:0003091!7.46e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.62e-23;3!UBERON:0001033;2.62e-23;3!UBERON:0003124;4.09e-23;3!UBERON:0000920;4.09e-23;3!UBERON:0003343;7.35e-18;4!UBERON:0004785;7.35e-18;4!UBERON:0000974;2.19e-12;6!UBERON:0005631;6.56e-08;10!UBERON:0000158;6.56e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.62e-23,3;UBERON:0001033,2.62e-23,3;UBERON:0010056,2.62e-23,3;UBERON:0000920,4.09e-23,3;UBERON:0003343,7.35e-18,4;UBERON:0004785,7.35e-18,4;UBERON:0003124,9.89e-11,7;UBERON:0000974,5.73e-08,10;UBERON:0001042,5.73e-08,10;UBERON:0009145,5.73e-08,10;UBERON:0006562,2.32e-07,11 | |||
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| ||
|short_description=p@chr3:87039601..87039605,- | |short_description=p@chr3:87039601..87039605,- | ||
}} | }} |
Latest revision as of 23:48, 29 July 2015
Short description: | p@chr3:87039601..87039605, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:87039601..87039605, - |
Coexpression cluster: | C461_oral_chorionic_squamous_amniotic_epidermoid_gall_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.09e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
tongue | 2.62e-23 | 3 |
gustatory system | 2.62e-23 | 3 |
future tongue | 2.62e-23 | 3 |
egg chorion | 4.09e-23 | 3 |
mucosa of oral region | 7.35e-18 | 4 |
respiratory system mucosa | 7.35e-18 | 4 |
chorion | 9.89e-11 | 7 |
neck | 5.73e-08 | 10 |
chordate pharynx | 5.73e-08 | 10 |
pharyngeal region of foregut | 5.73e-08 | 10 |
pharynx | 2.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.89e-20 | 14 |