FFCP PHASE1:Hg19::chr4:129191836..129191852,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:129191836..129191852,- | |||
|description=CAGE_peak_at_chr4:129191836..129191852,- | |description=CAGE_peak_at_chr4:129191836..129191852,- | ||
|id=chr4:129191836..129191852,- | |id=chr4:129191836..129191852,- | ||
|ontology_enrichment_celltype=CL:0000055!7.55e-07!180 | |ontology_enrichment_celltype=CL:0000055!7.55e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002616;9.87e-08;1!CL:0000136;1.19e-07;13!CL:0002591;3.40e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,9.91e-08,1;CL:0002591,5.50e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0003099;3.40e-07;1!UBERON:0003852;3.40e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2513;3.40e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,4.34e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0005705;3.40e-07;1!UBERON:0008193;3.40e-07;1!UBERON:0010912;3.40e-07;1!UBERON:0002514;3.40e-07;1!UBERON:0003457;3.40e-07;1!UBERON:0008907;3.40e-07;1!UBERON:0008001;3.40e-07;1!UBERON:0007213;3.40e-07;1!UBERON:0009891;3.40e-07;1!UBERON:0007914;3.40e-07;1!UBERON:0007375;3.40e-07;1!UBERON:0003323;3.40e-07;1!UBERON:0010258;3.40e-07;1!UBERON:0005253;3.40e-07;1!UBERON:0007842;3.40e-07;1!UBERON:0002397;3.40e-07;1!UBERON:0003113;3.40e-07;1!UBERON:0003277;3.40e-07;1!UBERON:0001709;3.40e-07;1!UBERON:0002244;3.40e-07;1!UBERON:0005620;3.40e-07;1!UBERON:0010364;3.40e-07;1!UBERON:0004288;3.40e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,1.74e-07,1;UBERON:0008193,1.74e-07,1;UBERON:0010912,1.74e-07,1;UBERON:0002514,1.74e-07,1;UBERON:0003457,1.74e-07,1;UBERON:0008907,1.74e-07,1;UBERON:0008001,1.74e-07,1;UBERON:0007213,1.74e-07,1;UBERON:0009891,1.74e-07,1;UBERON:0007914,1.74e-07,1;UBERON:0009292,1.74e-07,1;UBERON:0003099,1.74e-07,1;UBERON:0007375,1.74e-07,1;UBERON:0003323,1.74e-07,1;UBERON:0010258,1.74e-07,1;UBERON:0007842,1.74e-07,1;UBERON:0009494,1.74e-07,1;UBERON:0010042,1.74e-07,1;UBERON:0010045,1.74e-07,1;UBERON:0010259,1.74e-07,1;UBERON:0010359,1.74e-07,1;UBERON:0009526,1.74e-07,1;UBERON:0002397,1.74e-07,1;UBERON:0003113,1.74e-07,1;UBERON:0003277,1.74e-07,1;UBERON:0001709,1.74e-07,1;UBERON:0004066,1.74e-07,1;UBERON:0002244,1.74e-07,1;UBERON:0005620,1.74e-07,1;UBERON:0004362,1.74e-07,1;UBERON:0010364,1.74e-07,1;UBERON:0010046,1.74e-07,1;UBERON:0005868,1.74e-07,1;UBERON:0007238,1.74e-07,1;UBERON:0004288,1.74e-07,1;UBERON:0004068,1.74e-07,1;UBERON:0010334,1.74e-07,1;UBERON:0003852,1.74e-07,1;UBERON:0010253,1.74e-07,1 | |||
|phase1_expression=0.363356758541113,1.2846031433459,0.986680828671798,0,1.78784437770915,6.97870819280295,2.53299878168311,0,0.522371256399677,0,0,0,0,0.495065411840187,0.331397375727916,0,0.602694528023977,0.730310090387373,0,0,0,0,0,0.410623275218653,0.251085279189606,0.0764134057479513,0.0821005894499457,0,0,0,0.154816123316076,0,0.30120591877825,0,0.0774672005803016,0.142169232487422,0,0,0.200544447470142,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0.205601498999509,0,0,0.473447805734733,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0.361439152384566,0,1.30361867064741,0,0.486634870302636,0.189069634328136,0.665188192387692,0.351339142772504,0,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0.759783069987479,0,2.29469296599051,0,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0,0.454072282934794,0.576175924479999,0.234321431833797,0.312160076830321,0,0.149448680551801,0.352303495931295,0,0.280901613404497,0,0.245668634623536,0,1.18800285728205,0.247266929278557,0,0,0.336672227908132,0,0,0.438977620880838,0.612975591598039,0.300476117813194,0.113432183160021,0,0,0.423863802319124,0.900273288253207,0.412210116953756,0,0,0,0.0974370051611986,0.252433774244115,0.276149695926898,0,1.06502877754984,0.10075209822764,0.339121184620975,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0.505754070234305,0,0.441175890929576,0,0.474541238222193,0,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,1.44331342025273,0,0,0.577465791044295,0,0,0,0,0,0.234004265139238,0,0,0.335964256397719,0,0.358234090811393,0.290633938513962,0,0,0,0,0.144119953416961,0,0.126995788584338,0,0,1.71072446022705,0,0.600686115687835,0,0,0,0.1466765716419,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0.479249710983165,0,0,0.579125226670317,0,0,0,0.197030760201927,0,0.641715181398742,0,0,0.773288812777695,0,1.27587750330633,0.749007023947182,0,0,0.49076596687656,0,0.542530047399471,0.831883446123229,4.81758269752337,2.52323864054295,0.234282829985426,0.601892199455438,0,0,0,0,0.434418072340414,0,0.343143423810856,0,0.215714200818617,0,0.303127571446259,3.32870879020994,0.30239029332968,0.496215615637554,0.153461973288062,1.12264037773229,1.02511319404561,0.511707249066704,0.160853921143607,0,0.308419387605311,0.532685175939381,0.0821271560138091,0.519254429183621,0.232420756919918,0.120859449591622,0.40101294060657,0.184161977871793,0.229628896329213,0.182091168006717,0.655622074797121,0,0.0770153371044148,0,0,0.527758144464379,0,0.170093705276516,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0.256450125116389,0.984043937099117,0.325378394664303,0.309123034943167,0.183138929636687,0.165018999841176,0,0,0,0.096670718292122,0.308097234229289,0.307007349452259,0.275673144969061,0.322260734604821,0.290033387828457,0.340906509664404,0,0.330569830721956,0,0.127612712494584,0.10115778085555,0.464845549297286,1.5740617341532,0,0,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0.78494864019923,0.899362287916574,0.274537029736055,0.353437207037059,0,0,0,0,0.243713489631284,0,0.136499911407986,1.27264888758341,1.13008116620243,0,0.66343897524122,0.438450885253763,0,0,0,0.30982349809975,0,0,0.196498082026242,0,0.354761064070598,0.422215270595328,1.31717957183961,0,0,0.0962221127255121,0.670302275535787,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0.156679895773023,0,0,0.1605880751037,0.201799707191048,0.425846237690326,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,1.48482340416319,0.307160702099232,0.994147647766298,0,0.222617410045812,0,0,0.398495976502139,0,0.251932747854276,0.306806047506464,0,1.24415835064723,0.0898683511473268,0.179021174675609,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0.221158519862449,0.295547618953547,0,0.10893846351899,0.139423744278603,0.461701551022782,0.227884111694002,0,0.0897576444097721,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0.141353071433941,0,0,0.353830258013357,0,0,0,0.104421949505455,0,0,0,0.182454789215666,0,0.242780379534093,0.394584402849391,1.20990716048664,0.30607276163049,0,0.150323419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| ||
|short_description=p@chr4:129191836..129191852,- | |short_description=p@chr4:129191836..129191852,- | ||
}} | }} |
Latest revision as of 01:31, 30 July 2015
Short description: | p@chr4:129191836..129191852, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:129191836..129191852, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 9.91e-08 | 1 |
smooth muscle cell of the pulmonary artery | 5.50e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 4.34e-07 | 1 |